Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC140725.3-201ENST00000616193 880 ntBASIC2.52□□□□□ -2.01
SRP9P49458 AL355493.4-201ENST00000618530 292 ntBASIC2.52□□□□□ -2.01
SRP9P49458 AC007275.1-201ENST00000621243 671 ntBASIC2.52□□□□□ -2.01
SRP9P49458 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.52□□□□□ -2.01
SRP9P49458 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.52□□□□□ -2.01
SRP9P49458 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SRP9P49458 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SRP9P49458 AC138915.1-201ENST00000565427 1685 ntBASIC2.51□□□□□ -2.01
SRP9P49458 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SRP9P49458 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SRP9P49458 Y_RNA.62-201ENST00000362840 99 ntBASIC2.51□□□□□ -2.01
SRP9P49458 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SRP9P49458 SNORA9-201ENST00000384215 133 ntBASIC2.51□□□□□ -2.01
SRP9P49458 RPL7P8-201ENST00000411964 730 ntBASIC2.51□□□□□ -2.01
SRP9P49458 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.51□□□□□ -2.01
SRP9P49458 NUP35P2-201ENST00000416748 943 ntBASIC2.51□□□□□ -2.01
SRP9P49458 AL445528.1-201ENST00000426330 420 ntBASIC2.51□□□□□ -2.01
SRP9P49458 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.51□□□□□ -2.01
SRP9P49458 PTP4A1P3-201ENST00000433661 420 ntBASIC2.51□□□□□ -2.01
SRP9P49458 RPS20P5-201ENST00000434808 360 ntBASIC2.51□□□□□ -2.01
SRP9P49458 RPS7P2-201ENST00000435134 607 ntBASIC2.51□□□□□ -2.01
SRP9P49458 LSM1P1-201ENST00000438629 273 ntBASIC2.51□□□□□ -2.01
SRP9P49458 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.51□□□□□ -2.01
SRP9P49458 RPS26P56-201ENST00000444468 240 ntBASIC2.51□□□□□ -2.01
SRP9P49458 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.51□□□□□ -2.01
SRP9P49458 GAPDHP39-201ENST00000481866 979 ntBASIC2.51□□□□□ -2.01
SRP9P49458 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.51□□□□□ -2.01
SRP9P49458 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.51□□□□□ -2.01
SRP9P49458 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.51□□□□□ -2.01
SRP9P49458 HIGD1AP3-201ENST00000515857 278 ntBASIC2.51□□□□□ -2.01
SRP9P49458 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.51□□□□□ -2.01
SRP9P49458 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.51□□□□□ -2.01
SRP9P49458 NBEAP1-201ENST00000554452 979 ntBASIC2.51□□□□□ -2.01
SRP9P49458 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.51□□□□□ -2.01
SRP9P49458 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.51□□□□□ -2.01
SRP9P49458 RPL12P50-201ENST00000603116 116 ntBASIC2.51□□□□□ -2.01
SRP9P49458 AC009220.3-201ENST00000604318 586 ntBASIC2.51□□□□□ -2.01
SRP9P49458 AC090525.3-201ENST00000605601 189 ntBASIC2.51□□□□□ -2.01
SRP9P49458 AC090115.4-201ENST00000609970 188 ntBASIC2.51□□□□□ -2.01
SRP9P49458 VIS1.1-201ENST00000610517 203 ntBASIC2.51□□□□□ -2.01
SRP9P49458 MIR7973-1-201ENST00000614683 76 ntBASIC2.51□□□□□ -2.01
SRP9P49458 U73479.1-201ENST00000618062 168 ntBASIC2.51□□□□□ -2.01
SRP9P49458 AP001002.2-201ENST00000625137 386 ntBASIC2.51□□□□□ -2.01
SRP9P49458 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SRP9P49458 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
SRP9P49458 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SRP9P49458 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SRP9P49458 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.5□□□□□ -2.01
SRP9P49458 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.5□□□□□ -2.01
SRP9P49458 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SRP9P49458 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SRP9P49458 RNA5SP393-201ENST00000363423 117 ntBASIC2.5□□□□□ -2.01
SRP9P49458 RNU6-1251P-201ENST00000364502 107 ntBASIC2.5□□□□□ -2.01
SRP9P49458 RNU6-629P-201ENST00000384061 103 ntBASIC2.5□□□□□ -2.01
SRP9P49458 RNU6-244P-201ENST00000391028 104 ntBASIC2.5□□□□□ -2.01
SRP9P49458 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.5□□□□□ -2.01
SRP9P49458 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.5□□□□□ -2.01
SRP9P49458 RABEPKP1-201ENST00000440529 1026 ntBASIC2.5□□□□□ -2.01
SRP9P49458 CYCSP32-201ENST00000440548 321 ntBASIC2.5□□□□□ -2.01
SRP9P49458 NANOGNBP1-201ENST00000448444 480 ntBASIC2.5□□□□□ -2.01
SRP9P49458 RSL24D1P3-201ENST00000449255 495 ntBASIC2.5□□□□□ -2.01
SRP9P49458 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.5□□□□□ -2.01
SRP9P49458 AC234775.1-201ENST00000454247 670 ntBASIC2.5□□□□□ -2.01
SRP9P49458 snoU13.24-201ENST00000458998 104 ntBASIC2.5□□□□□ -2.01
SRP9P49458 HMGB1P22-201ENST00000505315 124 ntBASIC2.5□□□□□ -2.01
SRP9P49458 SNORA74D-201ENST00000516404 141 ntBASIC2.5□□□□□ -2.01
SRP9P49458 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.5□□□□□ -2.01
SRP9P49458 MTND2P26-201ENST00000528255 1029 ntBASIC2.5□□□□□ -2.01
SRP9P49458 AL133271.1-201ENST00000538229 291 ntBASIC2.5□□□□□ -2.01
SRP9P49458 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
SRP9P49458 AC128657.1-201ENST00000549459 145 ntBASIC2.5□□□□□ -2.01
SRP9P49458 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.5□□□□□ -2.01
SRP9P49458 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.5□□□□□ -2.01
SRP9P49458 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.5□□□□□ -2.01
SRP9P49458 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SRP9P49458 AC106791.2-201ENST00000604680 391 ntBASIC2.5□□□□□ -2.01
SRP9P49458 AC093732.2-201ENST00000607950 274 ntBASIC2.5□□□□□ -2.01
SRP9P49458 AC008083.4-201ENST00000615076 444 ntBASIC2.5□□□□□ -2.01
SRP9P49458 AC011472.4-201ENST00000615848 491 ntBASIC2.5□□□□□ -2.01
SRP9P49458 AC096644.4-201ENST00000563417 2912 ntBASIC2.5□□□□□ -2.01
SRP9P49458 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SRP9P49458 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SRP9P49458 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SRP9P49458 GNG5P1-201ENST00000255500 204 ntBASIC2.49□□□□□ -2.01
SRP9P49458 OR5H2-201ENST00000355273 945 ntBASIC2.49□□□□□ -2.01
SRP9P49458 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SRP9P49458 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.49□□□□□ -2.01
SRP9P49458 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.49□□□□□ -2.01
SRP9P49458 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.49□□□□□ -2.01
SRP9P49458 AC008280.1-201ENST00000418851 412 ntBASIC2.49□□□□□ -2.01
SRP9P49458 HMGN2P30-201ENST00000423237 256 ntBASIC2.49□□□□□ -2.01
SRP9P49458 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.49□□□□□ -2.01
SRP9P49458 MRPL50P4-201ENST00000446432 475 ntBASIC2.49□□□□□ -2.01
SRP9P49458 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.49□□□□□ -2.01
SRP9P49458 AL162389.1-201ENST00000449233 177 ntBASIC2.49□□□□□ -2.01
SRP9P49458 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.49□□□□□ -2.01
SRP9P49458 NPM1P13-201ENST00000452663 865 ntBASIC2.49□□□□□ -2.01
SRP9P49458 MTCYBP14-201ENST00000457471 715 ntBASIC2.49□□□□□ -2.01
SRP9P49458 AC096992.1-201ENST00000459808 709 ntBASIC2.49□□□□□ -2.01
SRP9P49458 RPL5P13-201ENST00000462840 709 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms