Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL606834.2-201ENST00000602954 668 ntBASIC3.19□□□□□ -1.9
RORAP35398 AL133393.1-201ENST00000603277 287 ntBASIC3.19□□□□□ -1.9
RORAP35398 AC009948.4-201ENST00000604692 675 ntBASIC3.19□□□□□ -1.9
RORAP35398 AL451074.6-201ENST00000608512 729 ntBASIC3.19□□□□□ -1.9
RORAP35398 VIS1.1-201ENST00000610517 203 ntBASIC3.19□□□□□ -1.9
RORAP35398 AL354976.1-201ENST00000613843 387 ntBASIC3.19□□□□□ -1.9
RORAP35398 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RORAP35398 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
RORAP35398 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RORAP35398 AC068620.4-201ENST00000636730 1182 ntBASIC3.19□□□□□ -1.9
RORAP35398 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RORAP35398 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
RORAP35398 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.19□□□□□ -1.9
RORAP35398 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.19□□□□□ -1.9
RORAP35398 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.18□□□□□ -1.9
RORAP35398 AL359893.1-201ENST00000447628 1580 ntBASIC3.18□□□□□ -1.9
RORAP35398 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RORAP35398 ZNF849P-201ENST00000594711 1566 ntBASIC3.18□□□□□ -1.9
RORAP35398 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RORAP35398 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.18□□□□□ -1.9
RORAP35398 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RORAP35398 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.18□□□□□ -1.9
RORAP35398 RNU6-374P-201ENST00000364146 108 ntBASIC3.18□□□□□ -1.9
RORAP35398 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 AP002784.2-201ENST00000397300 549 ntBASIC3.18□□□□□ -1.9
RORAP35398 AL591034.1-201ENST00000407447 340 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC109780.2-201ENST00000413467 845 ntBASIC3.18□□□□□ -1.9
RORAP35398 RPS7P13-201ENST00000413955 498 ntBASIC3.18□□□□□ -1.9
RORAP35398 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.18□□□□□ -1.9
RORAP35398 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
RORAP35398 RPL21P40-201ENST00000428586 483 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 B3GNT2P1-201ENST00000434960 952 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC091862.1-201ENST00000438016 1100 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 MRPS31P2-201ENST00000451581 518 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.18□□□□□ -1.9
RORAP35398 AC097262.1-201ENST00000452559 548 ntBASIC3.18□□□□□ -1.9
RORAP35398 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.18□□□□□ -1.9
RORAP35398 MTCO2P9-201ENST00000503214 694 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 AC004062.1-201ENST00000509926 645 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 RNU6-334P-201ENST00000517072 102 ntBASIC3.18□□□□□ -1.9
RORAP35398 SNORA31.20-201ENST00000517111 133 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
RORAP35398 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
RORAP35398 NDUFB9P3-201ENST00000521269 501 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.18□□□□□ -1.9
RORAP35398 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
RORAP35398 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.18□□□□□ -1.9
RORAP35398 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.18□□□□□ -1.9
RORAP35398 AC005951.1-201ENST00000576706 485 ntBASIC3.18□□□□□ -1.9
RORAP35398 MIR5680-201ENST00000577577 84 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC124283.4-201ENST00000581815 456 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC012493.2-201ENST00000595083 291 ntBASIC3.18□□□□□ -1.9
RORAP35398 AC016542.1-201ENST00000608259 493 ntBASIC3.18□□□□□ -1.9
RORAP35398 AP004247.3-201ENST00000608682 624 ntBASIC3.18□□□□□ -1.9
RORAP35398 AL590240.3-201ENST00000621416 943 ntBASIC3.18□□□□□ -1.9
RORAP35398 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.18□□□□□ -1.9
RORAP35398 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.18□□□□□ -1.9
RORAP35398 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RORAP35398 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RORAP35398 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RORAP35398 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RORAP35398 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RORAP35398 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RORAP35398 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RORAP35398 SSXP10-201ENST00000402595 565 ntBASIC3.17□□□□□ -1.9
RORAP35398 RNU2-72P-201ENST00000411175 163 ntBASIC3.17□□□□□ -1.9
RORAP35398 HMGN1P24-201ENST00000412282 298 ntBASIC3.17□□□□□ -1.9
RORAP35398 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 Z99755.1-201ENST00000414048 380 ntBASIC3.17□□□□□ -1.9
RORAP35398 MTCO3P12-201ENST00000416718 547 ntBASIC3.17□□□□□ -1.9
RORAP35398 RPS3AP9-201ENST00000417027 792 ntBASIC3.17□□□□□ -1.9
RORAP35398 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AL512649.1-201ENST00000428997 581 ntBASIC3.17□□□□□ -1.9
RORAP35398 AL512637.2-201ENST00000431287 1256 ntBASIC3.17□□□□□ -1.9
RORAP35398 MOB1AP2-201ENST00000446060 614 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
RORAP35398 RPL7P59-201ENST00000447700 943 ntBASIC3.17□□□□□ -1.9
RORAP35398 CDC42P1-201ENST00000456658 548 ntBASIC3.17□□□□□ -1.9
RORAP35398 RNU7-140P-201ENST00000459546 60 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC008379.1-201ENST00000463655 464 ntBASIC3.17□□□□□ -1.9
RORAP35398 RPL21P18-201ENST00000469899 480 ntBASIC3.17□□□□□ -1.9
RORAP35398 RPL7P38-201ENST00000488396 739 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC020893.1-201ENST00000502452 580 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC021678.1-201ENST00000505195 936 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC110794.1-201ENST00000505816 425 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.17□□□□□ -1.9
RORAP35398 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.17□□□□□ -1.9
RORAP35398 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms