Protein–RNA interactions for Protein: P12018

VPREB1, Immunoglobulin iota chain, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1P12018 RNU4-40P-201ENST00000364351 143 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 RNY4P34-201ENST00000364779 95 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 RPS4XP3-201ENST00000398541 413 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 VN1R12P-201ENST00000403778 876 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VPREB1P12018 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.23□□□□□ -1.89
VPREB1P12018 RNU2-36P-201ENST00000410361 191 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 RN7SKP56-201ENST00000410513 331 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 RNU6-248P-201ENST00000410720 107 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC007390.1-201ENST00000415722 356 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.23□□□□□ -1.89
VPREB1P12018 SLC35E1P1-201ENST00000419313 864 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC245054.1-201ENST00000420944 258 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.23□□□□□ -1.89
VPREB1P12018 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.23□□□□□ -1.89
VPREB1P12018 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 AL356535.1-201ENST00000440335 398 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AL450023.3-201ENST00000440592 271 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.23□□□□□ -1.89
VPREB1P12018 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.23□□□□□ -1.89
VPREB1P12018 AC020550.1-201ENST00000447385 163 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.23□□□□□ -1.89
VPREB1P12018 RPS20P20-201ENST00000460498 340 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 LARP1BP2-201ENST00000486594 519 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.23□□□□□ -1.89
VPREB1P12018 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.23□□□□□ -1.89
VPREB1P12018 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.23□□□□□ -1.89
VPREB1P12018 AC105313.1-201ENST00000509121 353 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 CDC42P4-201ENST00000510507 563 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 RNU2-46P-201ENST00000517038 113 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 AC100870.1-201ENST00000522035 505 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC027544.3-201ENST00000535082 757 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.23□□□□□ -1.89
VPREB1P12018 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VPREB1P12018 AC005771.1-201ENST00000585581 349 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 AC040904.1-201ENST00000590850 223 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.23□□□□□ -1.89
VPREB1P12018 RPL26P30-202ENST00000602923 645 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AL499605.1-201ENST00000604628 403 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC008277.2-201ENST00000605196 797 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AL451064.1-201ENST00000607718 471 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AL353600.1-201ENST00000608148 251 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC103710.2-201ENST00000609912 942 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AL391261.4-201ENST00000616012 481 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.23□□□□□ -1.89
VPREB1P12018 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 LINC02471-203ENST00000641941 4752 ntBASIC3.23□□□□□ -1.89
VPREB1P12018 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPREB1P12018 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.22□□□□□ -1.89
VPREB1P12018 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VPREB1P12018 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.22□□□□□ -1.89
VPREB1P12018 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VPREB1P12018 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPREB1P12018 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.22□□□□□ -1.89
VPREB1P12018 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPREB1P12018 RPL7P26-201ENST00000333817 754 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 U3.2-201ENST00000362981 210 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 RNU6-511P-201ENST00000363496 107 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 RNA5SP510-201ENST00000364697 99 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 SNORA67-201ENST00000384423 137 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 MIR600-201ENST00000385007 98 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPREB1P12018 RPL7P60-201ENST00000397636 735 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 RPS3AP36-201ENST00000398190 775 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 AL590704.1-201ENST00000402856 794 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 AP000580.1-201ENST00000404439 358 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 PPIAP31-201ENST00000405422 495 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 FAT1P1-201ENST00000406588 507 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 SNORA77-201ENST00000408716 125 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 MIR1183-201ENST00000408856 89 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.22□□□□□ -1.89
VPREB1P12018 Z85995.1-201ENST00000415547 335 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 AC140479.3-201ENST00000418944 1126 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 MTCO2P34-201ENST00000421994 607 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 CKS1BP6-201ENST00000424932 240 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 NANOGP6-201ENST00000429190 847 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 USP12PX-201ENST00000432383 1057 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.22□□□□□ -1.89
VPREB1P12018 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.22□□□□□ -1.89
VPREB1P12018 RPS29P9-201ENST00000440360 171 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.22□□□□□ -1.89
VPREB1P12018 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.22□□□□□ -1.89
VPREB1P12018 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.22□□□□□ -1.89
VPREB1P12018 AC009237.8-201ENST00000445492 379 ntBASIC3.22□□□□□ -1.89
VPREB1P12018 CBWD4P-201ENST00000445695 655 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms