Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SNORD82-201ENST00000365530 70 ntBASIC5.61□□□□□ -1.51
THBS1P07996 RN7SKP269-201ENST00000365545 319 ntBASIC5.61□□□□□ -1.51
THBS1P07996 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 RNU6-611P-201ENST00000384276 104 ntBASIC5.61□□□□□ -1.51
THBS1P07996 MRPL35P1-201ENST00000404272 572 ntBASIC5.61□□□□□ -1.51
THBS1P07996 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 RNU6-516P-201ENST00000411381 104 ntBASIC5.61□□□□□ -1.51
THBS1P07996 RPL21P24-201ENST00000413752 448 ntBASIC5.61□□□□□ -1.51
THBS1P07996 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.61□□□□□ -1.51
THBS1P07996 AL451074.5-201ENST00000415894 435 ntBASIC5.61□□□□□ -1.51
THBS1P07996 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.61□□□□□ -1.51
THBS1P07996 AC069213.2-201ENST00000420238 366 ntBASIC5.61□□□□□ -1.51
THBS1P07996 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.61□□□□□ -1.51
THBS1P07996 CHEK2P4-201ENST00000450340 246 ntBASIC5.61□□□□□ -1.51
THBS1P07996 RN7SL552P-201ENST00000462094 276 ntBASIC5.61□□□□□ -1.51
THBS1P07996 AC087385.1-201ENST00000475062 312 ntBASIC5.61□□□□□ -1.51
THBS1P07996 AC124945.1-201ENST00000485133 188 ntBASIC5.61□□□□□ -1.51
THBS1P07996 AC005912.1-201ENST00000495392 255 ntBASIC5.61□□□□□ -1.51
THBS1P07996 COX7A2P2-201ENST00000505291 250 ntBASIC5.61□□□□□ -1.51
THBS1P07996 AC113367.2-201ENST00000505749 160 ntBASIC5.61□□□□□ -1.51
THBS1P07996 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.61□□□□□ -1.51
THBS1P07996 RNU6-255P-201ENST00000516957 105 ntBASIC5.61□□□□□ -1.51
THBS1P07996 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.61□□□□□ -1.51
THBS1P07996 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.61□□□□□ -1.51
THBS1P07996 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 AL049555.1-201ENST00000562834 1933 ntBASIC5.61□□□□□ -1.51
THBS1P07996 BX284668.6-201ENST00000606899 438 ntBASIC5.61□□□□□ -1.51
THBS1P07996 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.61□□□□□ -1.51
THBS1P07996 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
THBS1P07996 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
THBS1P07996 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
THBS1P07996 AC022164.1-201ENST00000568767 2673 ntBASIC5.61□□□□□ -1.51
THBS1P07996 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.6□□□□□ -1.51
THBS1P07996 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
THBS1P07996 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
THBS1P07996 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.6□□□□□ -1.51
THBS1P07996 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
THBS1P07996 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
THBS1P07996 Y_RNA.183-201ENST00000363882 113 ntBASIC5.6□□□□□ -1.51
THBS1P07996 RNU1-130P-201ENST00000363930 160 ntBASIC5.6□□□□□ -1.51
THBS1P07996 Y_RNA.200-201ENST00000364018 102 ntBASIC5.6□□□□□ -1.51
THBS1P07996 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.6□□□□□ -1.51
THBS1P07996 RNU6-125P-201ENST00000384505 107 ntBASIC5.6□□□□□ -1.51
THBS1P07996 MIR188-201ENST00000385034 86 ntBASIC5.6□□□□□ -1.51
THBS1P07996 PCNPP3-201ENST00000393579 471 ntBASIC5.6□□□□□ -1.51
THBS1P07996 RNA5SP156-201ENST00000410250 110 ntBASIC5.6□□□□□ -1.51
THBS1P07996 RNU2-15P-201ENST00000410692 191 ntBASIC5.6□□□□□ -1.51
THBS1P07996 RNU2-25P-201ENST00000411041 191 ntBASIC5.6□□□□□ -1.51
THBS1P07996 RNU2-14P-201ENST00000411053 191 ntBASIC5.6□□□□□ -1.51
THBS1P07996 Y_RNA.793-201ENST00000411222 111 ntBASIC5.6□□□□□ -1.51
THBS1P07996 RNA5SP111-201ENST00000411386 101 ntBASIC5.6□□□□□ -1.51
THBS1P07996 MYL6P5-201ENST00000412707 459 ntBASIC5.6□□□□□ -1.51
THBS1P07996 AL035422.1-201ENST00000414193 397 ntBASIC5.6□□□□□ -1.51
THBS1P07996 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.6□□□□□ -1.51
THBS1P07996 AL360081.1-201ENST00000428299 555 ntBASIC5.6□□□□□ -1.51
THBS1P07996 PSMA2P3-201ENST00000429685 675 ntBASIC5.6□□□□□ -1.51
THBS1P07996 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.6□□□□□ -1.51
THBS1P07996 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.6□□□□□ -1.51
THBS1P07996 EIF5AP4-201ENST00000441206 465 ntBASIC5.6□□□□□ -1.51
THBS1P07996 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
THBS1P07996 RPS17P13-201ENST00000448974 407 ntBASIC5.6□□□□□ -1.51
THBS1P07996 AL353691.1-201ENST00000451332 387 ntBASIC5.6□□□□□ -1.51
THBS1P07996 LINC01399-202ENST00000458450 244 ntBASIC5.6□□□□□ -1.51
THBS1P07996 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
THBS1P07996 RPL31P60-201ENST00000478450 367 ntBASIC5.6□□□□□ -1.51
THBS1P07996 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.6□□□□□ -1.51
THBS1P07996 AC105384.2-201ENST00000508433 640 ntBASIC5.6□□□□□ -1.51
THBS1P07996 RNU6-397P-201ENST00000516226 104 ntBASIC5.6□□□□□ -1.51
THBS1P07996 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.6□□□□□ -1.51
THBS1P07996 AP004609.2-201ENST00000532177 190 ntBASIC5.6□□□□□ -1.51
THBS1P07996 AC036111.2-201ENST00000533247 901 ntBASIC5.6□□□□□ -1.51
THBS1P07996 AC063949.1-201ENST00000552900 865 ntBASIC5.6□□□□□ -1.51
THBS1P07996 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.6□□□□□ -1.51
THBS1P07996 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.6□□□□□ -1.51
THBS1P07996 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.6□□□□□ -1.51
THBS1P07996 MIR6071-201ENST00000616741 78 ntBASIC5.6□□□□□ -1.51
THBS1P07996 MIR6861-201ENST00000618657 64 ntBASIC5.6□□□□□ -1.51
THBS1P07996 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.6□□□□□ -1.51
THBS1P07996 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
THBS1P07996 THAP12P9-201ENST00000503971 2360 ntBASIC5.6□□□□□ -1.51
THBS1P07996 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
THBS1P07996 GNL2P1-201ENST00000451274 2190 ntBASIC5.6□□□□□ -1.51
THBS1P07996 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.6□□□□□ -1.51
THBS1P07996 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
THBS1P07996 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
THBS1P07996 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
THBS1P07996 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
THBS1P07996 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
THBS1P07996 MSL3P1-202ENST00000440028 1468 ntBASIC5.59□□□□□ -1.51
THBS1P07996 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
THBS1P07996 AC011978.2-201ENST00000569835 2054 ntBASIC5.59□□□□□ -1.51
THBS1P07996 AC027575.3-201ENST00000583058 2747 ntBASIC5.59□□□□□ -1.51
THBS1P07996 AL122126.1-201ENST00000546905 1318 ntBASIC5.59□□□□□ -1.51
THBS1P07996 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.59□□□□□ -1.51
THBS1P07996 PROS2P-201ENST00000474651 1951 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms