Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC015871.2-201ENST00000603605 948 ntBASIC3.17□□□□□ -1.9
TPM3P06753 AC009220.3-201ENST00000604318 586 ntBASIC3.17□□□□□ -1.9
TPM3P06753 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM3P06753 AC007275.1-201ENST00000621243 671 ntBASIC3.17□□□□□ -1.9
TPM3P06753 AL161637.1-201ENST00000622380 412 ntBASIC3.17□□□□□ -1.9
TPM3P06753 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM3P06753 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TPM3P06753 AC010297.1-201ENST00000623948 149 ntBASIC3.17□□□□□ -1.9
TPM3P06753 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM3P06753 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
TPM3P06753 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TPM3P06753 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TPM3P06753 MIR26A1-201ENST00000362205 77 ntBASIC3.16□□□□□ -1.9
TPM3P06753 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.16□□□□□ -1.9
TPM3P06753 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TPM3P06753 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
TPM3P06753 SFR1P1-201ENST00000403720 688 ntBASIC3.16□□□□□ -1.9
TPM3P06753 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM3P06753 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM3P06753 PTP4A1P3-201ENST00000433661 420 ntBASIC3.16□□□□□ -1.9
TPM3P06753 RABEPKP1-201ENST00000440529 1026 ntBASIC3.16□□□□□ -1.9
TPM3P06753 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM3P06753 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM3P06753 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM3P06753 AP002345.1-201ENST00000456493 928 ntBASIC3.16□□□□□ -1.9
TPM3P06753 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM3P06753 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM3P06753 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.16□□□□□ -1.9
TPM3P06753 CIR1P1-201ENST00000524055 1133 ntBASIC3.16□□□□□ -1.9
TPM3P06753 AC087373.1-201ENST00000524920 491 ntBASIC3.16□□□□□ -1.9
TPM3P06753 AL133271.1-201ENST00000538229 291 ntBASIC3.16□□□□□ -1.9
TPM3P06753 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM3P06753 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM3P06753 MIR4697-201ENST00000582977 78 ntBASIC3.16□□□□□ -1.9
TPM3P06753 MIMT1-201ENST00000597105 1050 ntBASIC3.16□□□□□ -1.9
TPM3P06753 RPL12P50-201ENST00000603116 116 ntBASIC3.16□□□□□ -1.9
TPM3P06753 AC005046.1-201ENST00000608515 625 ntBASIC3.16□□□□□ -1.9
TPM3P06753 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM3P06753 AC079228.1-201ENST00000624774 1049 ntBASIC3.16□□□□□ -1.9
TPM3P06753 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM3P06753 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM3P06753 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TPM3P06753 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TPM3P06753 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.15□□□□□ -1.9
TPM3P06753 SNORA71.1-201ENST00000364523 117 ntBASIC3.15□□□□□ -1.91
TPM3P06753 DEFA7P-201ENST00000382676 285 ntBASIC3.15□□□□□ -1.91
TPM3P06753 RNU6-837P-201ENST00000391056 108 ntBASIC3.15□□□□□ -1.91
TPM3P06753 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM3P06753 AC073310.1-201ENST00000423226 1033 ntBASIC3.15□□□□□ -1.91
TPM3P06753 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM3P06753 LSM1P1-201ENST00000438629 273 ntBASIC3.15□□□□□ -1.91
TPM3P06753 GAPDHP39-201ENST00000481866 979 ntBASIC3.15□□□□□ -1.91
TPM3P06753 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.15□□□□□ -1.91
TPM3P06753 PRELID3BP5-201ENST00000508612 460 ntBASIC3.15□□□□□ -1.91
TPM3P06753 AC139103.1-201ENST00000534696 1030 ntBASIC3.15□□□□□ -1.91
TPM3P06753 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM3P06753 NBEAP1-201ENST00000554452 979 ntBASIC3.15□□□□□ -1.91
TPM3P06753 SERPINE4P-201ENST00000554978 281 ntBASIC3.15□□□□□ -1.91
TPM3P06753 MTCYBP28-201ENST00000566728 1132 ntBASIC3.15□□□□□ -1.91
TPM3P06753 AC103881.1-201ENST00000603476 538 ntBASIC3.15□□□□□ -1.91
TPM3P06753 AL133507.1-201ENST00000605269 557 ntBASIC3.15□□□□□ -1.91
TPM3P06753 BX664608.1-201ENST00000610519 487 ntBASIC3.15□□□□□ -1.91
TPM3P06753 AC008083.4-201ENST00000615076 444 ntBASIC3.15□□□□□ -1.91
TPM3P06753 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.15□□□□□ -1.91
TPM3P06753 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM3P06753 ZNF807-201ENST00000328088 1707 ntBASIC3.15□□□□□ -1.91
TPM3P06753 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM3P06753 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TPM3P06753 MTCO1P12-201ENST00000414273 1543 ntBASIC3.14□□□□□ -1.91
TPM3P06753 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TPM3P06753 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.14□□□□□ -1.91
TPM3P06753 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TPM3P06753 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TPM3P06753 MIR6073-201ENST00000352083 89 ntBASIC3.14□□□□□ -1.91
TPM3P06753 NACA3P-201ENST00000359690 648 ntBASIC3.14□□□□□ -1.91
TPM3P06753 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC092638.1-201ENST00000411966 1275 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM3P06753 AL159987.2-201ENST00000432754 307 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC091390.1-201ENST00000433904 331 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AL513043.1-201ENST00000439124 535 ntBASIC3.14□□□□□ -1.91
TPM3P06753 CDC27P1-201ENST00000445384 715 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC027673.1-201ENST00000456245 405 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC091153.1-201ENST00000466297 402 ntBASIC3.14□□□□□ -1.91
TPM3P06753 RN7SL542P-201ENST00000467147 294 ntBASIC3.14□□□□□ -1.91
TPM3P06753 RPS23P3-201ENST00000470993 430 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC008565.1-201ENST00000509046 885 ntBASIC3.14□□□□□ -1.91
TPM3P06753 SNORA31.15-201ENST00000516771 132 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC023632.4-201ENST00000517783 191 ntBASIC3.14□□□□□ -1.91
TPM3P06753 IGKV2D-36-201ENST00000518643 226 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC090136.1-201ENST00000520009 240 ntBASIC3.14□□□□□ -1.91
TPM3P06753 HMGB1P41-201ENST00000520234 440 ntBASIC3.14□□□□□ -1.91
TPM3P06753 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM3P06753 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM3P06753 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.14□□□□□ -1.91
TPM3P06753 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM3P06753 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.14□□□□□ -1.91
TPM3P06753 SNHG22-203ENST00000617833 660 ntBASIC3.14□□□□□ -1.91
TPM3P06753 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
TPM3P06753 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms