Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST1O76090 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST1O76090 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST1O76090 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST1O76090 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST1O76090 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST1O76090 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BEST1O76090 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
BEST1O76090 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
BEST1O76090 RPL23AP57-201ENST00000332361 466 ntBASIC3.95□□□□□ -1.78
BEST1O76090 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 DHFRP6-201ENST00000401776 268 ntBASIC3.95□□□□□ -1.78
BEST1O76090 RNA5SP104-201ENST00000410989 118 ntBASIC3.95□□□□□ -1.78
BEST1O76090 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST1O76090 RAC1P3-201ENST00000416129 580 ntBASIC3.95□□□□□ -1.78
BEST1O76090 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.95□□□□□ -1.78
BEST1O76090 OR1AA1P-201ENST00000419597 916 ntBASIC3.95□□□□□ -1.78
BEST1O76090 MTCO2P20-201ENST00000437339 673 ntBASIC3.95□□□□□ -1.78
BEST1O76090 RPS26P15-201ENST00000488067 348 ntBASIC3.95□□□□□ -1.78
BEST1O76090 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.95□□□□□ -1.78
BEST1O76090 AL024509.2-201ENST00000493462 493 ntBASIC3.95□□□□□ -1.78
BEST1O76090 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.95□□□□□ -1.78
BEST1O76090 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.95□□□□□ -1.78
BEST1O76090 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.95□□□□□ -1.78
BEST1O76090 RNU6-1095P-201ENST00000516148 108 ntBASIC3.95□□□□□ -1.78
BEST1O76090 RNU1-95P-201ENST00000516357 160 ntBASIC3.95□□□□□ -1.78
BEST1O76090 RNA5SP164-201ENST00000516533 110 ntBASIC3.95□□□□□ -1.78
BEST1O76090 RNU1-128P-201ENST00000516704 160 ntBASIC3.95□□□□□ -1.78
BEST1O76090 AC008802.1-201ENST00000519121 791 ntBASIC3.95□□□□□ -1.78
BEST1O76090 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST1O76090 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.95□□□□□ -1.78
BEST1O76090 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.95□□□□□ -1.78
BEST1O76090 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST1O76090 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.95□□□□□ -1.78
BEST1O76090 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.95□□□□□ -1.78
BEST1O76090 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.95□□□□□ -1.78
BEST1O76090 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.95□□□□□ -1.78
BEST1O76090 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.95□□□□□ -1.78
BEST1O76090 AC068790.5-201ENST00000602741 355 ntBASIC3.95□□□□□ -1.78
BEST1O76090 AL391001.1-201ENST00000602747 715 ntBASIC3.95□□□□□ -1.78
BEST1O76090 AC245389.1-201ENST00000605141 529 ntBASIC3.95□□□□□ -1.78
BEST1O76090 AL592221.1-201ENST00000605266 382 ntBASIC3.95□□□□□ -1.78
BEST1O76090 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.95□□□□□ -1.78
BEST1O76090 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BEST1O76090 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BEST1O76090 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
BEST1O76090 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
BEST1O76090 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
BEST1O76090 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BEST1O76090 RNA5SP51-201ENST00000364750 119 ntBASIC3.94□□□□□ -1.78
BEST1O76090 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 RPL23AP29-201ENST00000397284 453 ntBASIC3.94□□□□□ -1.78
BEST1O76090 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 CYCSP45-201ENST00000402289 315 ntBASIC3.94□□□□□ -1.78
BEST1O76090 TPMTP2-201ENST00000414372 726 ntBASIC3.94□□□□□ -1.78
BEST1O76090 AC245052.5-201ENST00000416320 649 ntBASIC3.94□□□□□ -1.78
BEST1O76090 SYF2P2-201ENST00000417620 583 ntBASIC3.94□□□□□ -1.78
BEST1O76090 AC092647.1-201ENST00000420654 287 ntBASIC3.94□□□□□ -1.78
BEST1O76090 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST1O76090 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST1O76090 AC007742.1-201ENST00000425789 329 ntBASIC3.94□□□□□ -1.78
BEST1O76090 ELOCP26-201ENST00000436067 329 ntBASIC3.94□□□□□ -1.78
BEST1O76090 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 MUPP-201ENST00000438111 566 ntBASIC3.94□□□□□ -1.78
BEST1O76090 MTND3P1-201ENST00000441336 220 ntBASIC3.94□□□□□ -1.78
BEST1O76090 AL133547.1-201ENST00000448546 220 ntBASIC3.94□□□□□ -1.78
BEST1O76090 NECAP1P2-201ENST00000455668 727 ntBASIC3.94□□□□□ -1.78
BEST1O76090 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BEST1O76090 FAM172BP-201ENST00000487497 1089 ntBASIC3.94□□□□□ -1.78
BEST1O76090 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST1O76090 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BEST1O76090 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.94□□□□□ -1.78
BEST1O76090 AC024224.1-201ENST00000538284 609 ntBASIC3.94□□□□□ -1.78
BEST1O76090 AC008011.1-201ENST00000545989 227 ntBASIC3.94□□□□□ -1.78
BEST1O76090 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 AC087465.1-201ENST00000560574 245 ntBASIC3.94□□□□□ -1.78
BEST1O76090 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST1O76090 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST1O76090 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.94□□□□□ -1.78
BEST1O76090 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.94□□□□□ -1.78
BEST1O76090 AC061975.8-201ENST00000587058 721 ntBASIC3.94□□□□□ -1.78
BEST1O76090 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.94□□□□□ -1.78
BEST1O76090 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms