Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 RN7SKP184-201ENST00000362348 333 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 U3.10-201ENST00000364459 214 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 RNU6-1081P-201ENST00000384537 107 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 SNORD73A-201ENST00000386062 65 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AL033519.1-201ENST00000407266 307 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 RNU6-1140P-201ENST00000410517 106 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC245096.1-201ENST00000413104 546 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AL451074.5-201ENST00000415894 435 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC092423.1-201ENST00000430165 186 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 RPL23AP25-201ENST00000430973 463 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 CYCSP43-201ENST00000438233 310 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AL353662.1-201ENST00000439099 327 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 HMGN1P2-201ENST00000445197 310 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC073476.1-201ENST00000452854 407 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 RNU7-120P-201ENST00000459334 63 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 RN7SL790P-201ENST00000474043 298 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC124945.1-201ENST00000485133 188 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 RN7SL612P-201ENST00000497704 295 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 CR383656.7-201ENST00000548164 174 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 MIR5692A1-201ENST00000580523 69 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 OR1M4P-201ENST00000589199 287 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC007566.2-201ENST00000603642 413 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 FP236240.3-201ENST00000623061 327 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.49□□□□□ -1.37
RCCD1A6NED2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 AC110716.2-201ENST00000563865 3945 ntBASIC6.49□□□□□ -1.37
RCCD1A6NED2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RCCD1A6NED2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RCCD1A6NED2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RCCD1A6NED2 AC078880.4-201ENST00000617627 1749 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 SNORD81.1-201ENST00000363064 77 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 MIR215-201ENST00000384858 110 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 MIR551B-201ENST00000384984 96 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 RPS15AP6-201ENST00000420703 385 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 KRT8P51-201ENST00000438938 274 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RCCD1A6NED2 AL596266.1-201ENST00000448132 400 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 RPL29P29-201ENST00000448725 423 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 NDUFB4P10-201ENST00000452541 359 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 RPL21P41-201ENST00000459863 264 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 RN7SL352P-201ENST00000466002 277 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 RPS23P5-201ENST00000495419 428 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 AC005798.1-201ENST00000513715 387 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 MINOS1P4-201ENST00000515470 318 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 RNU6-390P-201ENST00000516259 103 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 AMZ2P1-203ENST00000565833 850 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 HNRNPCP4-201ENST00000571636 900 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 AC067852.3-201ENST00000589177 561 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 AC068790.4-201ENST00000602474 263 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RCCD1A6NED2 AC123768.4-201ENST00000616244 701 ntBASIC6.48□□□□□ -1.37
RCCD1A6NED2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RCCD1A6NED2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RCCD1A6NED2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RCCD1A6NED2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.48□□□□□ -1.37
RCCD1A6NED2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RCCD1A6NED2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RCCD1A6NED2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RCCD1A6NED2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RCCD1A6NED2 RNU6-371P-201ENST00000364283 108 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 RNU6-933P-201ENST00000384424 107 ntBASIC6.47□□□□□ -1.37
RCCD1A6NED2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.47□□□□□ -1.37
RCCD1A6NED2 AKR1B10P1-201ENST00000425765 942 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms