Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC006111.3-201ENST00000622137 383 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AL049737.1-201ENST00000413920 1403 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AC096644.4-201ENST00000563417 2912 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 RNU6-629P-201ENST00000384061 103 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 U3.42-201ENST00000408746 214 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 RPL7P8-201ENST00000411964 730 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AC234782.4-201ENST00000417646 1048 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 MTCYBP24-201ENST00000420387 1106 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 MTATP6P4-201ENST00000427725 675 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 Z96811.1-201ENST00000445880 108 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AL162389.1-201ENST00000449233 177 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 NPM1P13-201ENST00000452663 865 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 HMGB1P15-201ENST00000453854 435 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 RPL31P53-201ENST00000457065 348 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 RPL21P131-201ENST00000497298 483 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AC083906.5-201ENST00000503722 328 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 RNU6-1004P-201ENST00000516584 111 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 RN7SKP57-201ENST00000517248 293 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AC074029.1-201ENST00000552531 1044 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AC125494.3-201ENST00000602759 455 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AC015871.2-201ENST00000603605 948 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AC113368.1-201ENST00000603736 382 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AL442067.2-201ENST00000614033 363 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 U73479.1-201ENST00000618062 168 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 AP003122.6-201ENST00000623831 495 ntBASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DRB4X5D2U9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 SNORD56.5-201ENST00000364281 72 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 RNU1-140P-201ENST00000365040 165 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 RNU1-109P-201ENST00000383960 147 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 SNORA11C-201ENST00000408532 129 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 RPS7P2-201ENST00000435134 607 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AL671855.1-201ENST00000446875 1203 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 HMGB1P26-201ENST00000452520 628 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 RPS24P6-201ENST00000452670 400 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AL035407.2-201ENST00000454090 378 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AC027673.1-201ENST00000456245 405 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 DYNLL1P6-201ENST00000503440 264 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 SNORA31.1-201ENST00000515993 133 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 SNORA31.5-201ENST00000516190 133 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 RNA5SP341-201ENST00000516261 117 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 IGKV2-36-201ENST00000519999 223 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AC090695.1-201ENST00000561269 1222 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 IGHV3-29-201ENST00000604817 344 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AL162274.2-201ENST00000614406 332 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DRB4X5D2U9 AC006378.2-201ENST00000623178 2476 ntBASIC2.15□□□□□ -2.06
HLA-DRB4X5D2U9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 RPL9P7-201ENST00000330965 580 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 MIR208A-201ENST00000362287 71 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 RNU6-1027P-201ENST00000383998 107 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 BTBD10P2-201ENST00000404779 676 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 RPS6P14-201ENST00000425165 719 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 MTCYBP12-201ENST00000440559 1134 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 Z77249.1-201ENST00000444622 1175 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 RSL24D1P3-201ENST00000449255 495 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 snoU13.24-201ENST00000458998 104 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 AC010301.1-201ENST00000473936 355 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 HMGB1P3-201ENST00000502802 616 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 SCGB1D5P-201ENST00000515134 247 ntBASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DRB4X5D2U9 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms