Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC068831.4-201ENST00000556118 109 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC006270.2-201ENST00000578523 652 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 RSL24D1P11-201ENST00000591045 491 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC022146.1-201ENST00000595307 847 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 BPIFA4P-203ENST00000603168 689 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC012409.3-201ENST00000611343 981 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC00622-201ENST00000562811 1570 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC092435.4-201ENST00000623012 4159 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 CPHL1P-201ENST00000461341 3407 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU1-20P-201ENST00000363314 162 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU4-24P-201ENST00000364565 139 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 SNORA51.2-201ENST00000364595 132 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 RNA5SP151-201ENST00000365632 117 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 MIR607-201ENST00000385241 96 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 Y_RNA.608-201ENST00000410647 95 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC016907.1-201ENST00000419483 435 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 RPS12P10-201ENST00000427031 377 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL23AP25-201ENST00000430973 463 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 MTND1P28-201ENST00000435623 950 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 THAP5P1-201ENST00000439089 262 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AP000936.2-201ENST00000447151 681 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 NPM1P49-201ENST00000448027 714 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL21P126-201ENST00000470049 478 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU6-201P-201ENST00000517100 61 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AP000827.1-201ENST00000527814 258 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AP002748.2-201ENST00000528671 348 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AP004242.1-201ENST00000533701 349 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 BNIP3P8-201ENST00000597863 560 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC068790.3-201ENST00000602988 553 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC011468.4-201ENST00000603942 409 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AL158211.4-201ENST00000606988 584 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AL590282.1-201ENST00000610379 1136 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 MIR6758-201ENST00000620653 63 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC091905.2-201ENST00000623143 306 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 AC244258.1-201ENST00000637553 1071 ntBASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A3BPQ9Y5P4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 OR51H2P-202ENST00000641424 3046 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 Y_RNA.46-201ENST00000362695 102 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 RPS20P2-201ENST00000402520 389 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 RAB28P1-201ENST00000411517 641 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 HMGN1P14-201ENST00000412459 517 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC233728.2-201ENST00000425348 757 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC099563.1-201ENST00000456086 418 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 snoU13.24-201ENST00000458998 104 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 RN7SL817P-201ENST00000480777 288 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 HMGB1P22-201ENST00000505315 124 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 NPM1P41-201ENST00000512920 831 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC015795.1-201ENST00000513669 327 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AP000907.2-201ENST00000530827 353 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AP002453.2-201ENST00000533503 320 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC087481.2-201ENST00000565492 330 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC005771.1-201ENST00000585581 349 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms