Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 RN7SKP276-201ENST00000516242 268 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 RNU6-506P-201ENST00000516553 94 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC008694.2-201ENST00000517591 306 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC103783.1-201ENST00000520506 373 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC012339.2-201ENST00000523996 453 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AP003497.1-201ENST00000528472 562 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AP003122.4-201ENST00000530980 758 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC087481.2-201ENST00000565492 330 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 HMGN1P30-201ENST00000589286 268 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 RNF138P2-201ENST00000603490 592 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC010424.2-201ENST00000607594 443 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC091304.9-201ENST00000612091 226 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AL356585.4-201ENST00000623078 1229 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 RNU6-989P-201ENST00000362756 107 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 U8.3-201ENST00000363321 132 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC114755.2-201ENST00000413520 361 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC013429.2-201ENST00000418798 781 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 EIF1P1-201ENST00000421436 341 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AL391219.1-201ENST00000422570 483 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC233728.2-201ENST00000425348 757 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 TIMM9P3-201ENST00000428659 274 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC005154.2-201ENST00000438110 379 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AL049734.2-201ENST00000441066 616 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 H2AFZP5-201ENST00000446960 382 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC091180.1-201ENST00000462104 372 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 HMGB1P25-201ENST00000468402 607 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC108145.1-201ENST00000503770 153 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 HMGN1P28-201ENST00000521340 364 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AP001880.2-201ENST00000538233 448 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AL356432.3-201ENST00000568952 465 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AL592295.2-201ENST00000612578 206 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC136475.10-201ENST00000620253 385 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC009268.2-201ENST00000621925 457 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 SEPT14P19-203ENST00000633205 211 ntBASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA3Q9Y5H0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 MIR181A1-201ENST00000385026 110 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 RPL23AP32-201ENST00000395315 459 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 RAD23BP2-201ENST00000416003 1207 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC137499.1-201ENST00000427602 88 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AL121871.1-201ENST00000443413 436 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 RPS5P7-201ENST00000456664 608 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms