Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC105384.2-201ENST00000508433 640 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 RN7SKP219-201ENST00000516825 296 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 BTF3P12-201ENST00000519620 469 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AP005435.4-201ENST00000529514 284 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC005341.1-201ENST00000571086 708 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 OR4K8P-201ENST00000578842 1048 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 COX6CP3-201ENST00000580869 223 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AL121992.2-201ENST00000606262 256 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AL133255.1-201ENST00000606374 441 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 RNU6-89P-201ENST00000606519 100 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AL122125.1-201ENST00000616999 600 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AP000346.3-201ENST00000622821 210 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 MUC2-202ENST00000613187 4845 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 HSPE1P11-201ENST00000339579 310 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 Y_RNA.184-201ENST00000363884 108 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AL356967.1-201ENST00000406305 431 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 RNA5SP345-201ENST00000410646 108 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC245028.1-201ENST00000423259 256 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 MTCO2P12-201ENST00000427426 682 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 RPL12P17-201ENST00000432393 498 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 MTATP6P16-201ENST00000434543 526 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC024082.2-201ENST00000434771 238 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 PSMD10P3-201ENST00000437000 448 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC096775.1-201ENST00000437724 448 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 HMGB1P18-201ENST00000438801 619 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 MRPS17P3-201ENST00000465453 385 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC091885.1-201ENST00000506658 268 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 RNU4-49P-201ENST00000516080 140 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 SUMO2P20-201ENST00000520803 283 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC092490.3-201ENST00000545370 572 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 SCOCP1-201ENST00000554676 349 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 MIR4330-201ENST00000579077 105 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 MIR4311-201ENST00000580794 100 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AP001029.3-201ENST00000588063 596 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 NANOGP3-201ENST00000605855 286 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 MIR6133-201ENST00000617057 108 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 AC244100.1-202ENST00000621554 382 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms