Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL353752.1-201ENST00000454946 260 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 RNU6-953P-201ENST00000459154 107 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 RPL9P32-201ENST00000464118 620 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AC114801.2-201ENST00000503825 781 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 NDUFB5P1-201ENST00000508134 564 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 RNU6-390P-201ENST00000516259 103 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 IGKV2D-36-201ENST00000518643 226 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AP003385.6-201ENST00000531603 374 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AC010547.6-201ENST00000571789 193 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AL512329.2-201ENST00000607350 548 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AC078938.1-201ENST00000620993 318 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AC138627.2-201ENST00000624202 601 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 AL731556.1-201ENST00000394628 3711 ntBASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIMD1Q9UGP4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 MIR375-201ENST00000362103 64 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 RNU2-64P-201ENST00000411315 191 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AC011933.1-201ENST00000413334 321 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AC016712.1-201ENST00000431088 378 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 DYNLT3P2-201ENST00000442517 295 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 RN7SL799P-201ENST00000475891 298 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 VN1R104P-201ENST00000505115 1009 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 RNU6-120P-201ENST00000516077 103 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 SNORA40.14-201ENST00000516543 86 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 IGLV3-6-201ENST00000523937 250 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AP006587.4-201ENST00000526053 529 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 MRPS21P9-201ENST00000571150 257 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AC025857.2-201ENST00000602711 238 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 FO393422.1-201ENST00000603908 708 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 AC104695.2-201ENST00000605056 775 ntBASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.36□□□□□ -1.39
LIMD1Q9UGP4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AP005432.1-201ENST00000580891 3485 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC024651.2-201ENST00000562480 2098 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 HSPA8P4-201ENST00000511877 1920 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 MFSD8-239ENST00000641590 2479 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 RNA5SP132-201ENST00000364725 118 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 Y_RNA.276-201ENST00000364732 109 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 Y_RNA.350-201ENST00000365409 98 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 Y_RNA.485-201ENST00000384395 102 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 RNU6-45P-201ENST00000384471 107 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 Y_RNA.512-201ENST00000384518 102 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC013442.1-201ENST00000397347 228 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC110754.1-201ENST00000399740 601 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC099677.1-201ENST00000420575 175 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AL391219.1-201ENST00000422570 483 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 RPL7P2-201ENST00000427639 268 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC011005.2-201ENST00000487324 359 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 RN7SL466P-201ENST00000497546 295 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 RNA5SP34-201ENST00000516887 130 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 RN7SKP60-201ENST00000516985 239 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC097467.4-201ENST00000605504 141 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC141273.2-201ENST00000618989 130 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AC015967.1-201ENST00000619893 476 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AL691477.1-201ENST00000624398 162 ntBASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMD1Q9UGP4 AL672167.1-205ENST00000641112 3080 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms