Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MIR3118-1-201ENST00000581787 76 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 BNIP3P10-201ENST00000605360 577 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 CR381572.2-201ENST00000624852 397 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.09□□□□□ -1.6
PPARGC1AQ9UBK2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PPARGC1AQ9UBK2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
PPARGC1AQ9UBK2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 MTND5P33-201ENST00000571250 1450 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC007529.1-201ENST00000418574 2178 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 CKAP2P1-201ENST00000555477 2049 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 RNU6-1011P-201ENST00000384668 107 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 SNRPFP1-201ENST00000414761 252 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AL035410.1-201ENST00000427409 427 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 RPL7P54-201ENST00000438336 674 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC022364.2-201ENST00000457963 554 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 snoU13.8-201ENST00000458890 104 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 RNU6-261P-201ENST00000459506 102 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 NDUFA5P12-201ENST00000503796 343 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 GAPDHP56-201ENST00000506031 988 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 EDDM3DP-201ENST00000554692 434 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 MIR3167-201ENST00000579623 85 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 RPL26P30-202ENST00000602923 645 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC087283.1-201ENST00000604029 1074 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 RNU4-89P-201ENST00000607443 133 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC090510.2-201ENST00000617465 629 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC006504.8-201ENST00000621046 635 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC019206.1-201ENST00000621938 425 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC091953.2-201ENST00000623979 160 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC099654.10-201ENST00000640395 161 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 LINC00622-201ENST00000562811 1570 ntBASIC5.08□□□□□ -1.6
PPARGC1AQ9UBK2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 NUP58P1-201ENST00000502546 1738 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 OR5J1P-201ENST00000313544 939 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 RNA5SP258-201ENST00000362750 119 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 RNU1-130P-201ENST00000363930 160 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 SNORA58B-201ENST00000364259 136 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 SNORA20.2-201ENST00000383922 131 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 RNU6-456P-201ENST00000384493 107 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 RN7SKP125-201ENST00000410481 302 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 RNA5SP345-201ENST00000410646 108 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 RPL31P2-201ENST00000413849 377 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 NUP35P2-201ENST00000416748 943 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 MRPL50P2-201ENST00000416821 482 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 MTND1P14-201ENST00000427400 950 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 USP9YP9-201ENST00000429406 715 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 AC119618.1-201ENST00000434191 222 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 LYPLA1P1-201ENST00000434514 622 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 AC093414.1-201ENST00000434712 514 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 AC112498.1-201ENST00000444401 332 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 AL031584.1-201ENST00000447169 754 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 AC000111.2-201ENST00000448200 210 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 FDX1P2-201ENST00000450769 375 ntBASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.07□□□□□ -1.6
PPARGC1AQ9UBK2 AL356981.1-201ENST00000454879 684 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms