Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 IGHVIII-44-202ENST00000636235 289 ntBASIC2.53□□□□□ -2
CCDC88CQ9P219 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2
CCDC88CQ9P219 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC88CQ9P219 AC096656.1-201ENST00000623826 1364 ntBASIC2.53□□□□□ -2
CCDC88CQ9P219 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CCDC88CQ9P219 RPLP0P7-201ENST00000416050 667 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 MUPP-201ENST00000438111 566 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AL592437.1-201ENST00000443781 492 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 RPL36AP33-201ENST00000450395 310 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AC114781.4-201ENST00000513707 639 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 RNF6P1-201ENST00000444889 1784 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AC073069.1-201ENST00000428657 441 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 HSPE1P28-201ENST00000443139 211 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 RPS27P5-201ENST00000444247 244 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 RPL7P36-201ENST00000444633 681 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 MTND2P8-201ENST00000450555 1025 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 GSTA11P-201ENST00000452866 669 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AP003122.3-201ENST00000526316 255 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 PTP4A1P6-201ENST00000531034 478 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 ZNF861P-201ENST00000588126 639 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 FAM60CP-201ENST00000591086 664 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AC079089.3-201ENST00000603094 673 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AC096947.1-201ENST00000603233 470 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AC002076.2-201ENST00000617362 122 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 ZNF33CP-201ENST00000432492 2030 ntBASIC2.52□□□□□ -2.01
CCDC88CQ9P219 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC88CQ9P219 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 ELOCP6-201ENST00000429066 328 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 RPS24P8-201ENST00000431490 402 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 ELOCP12-201ENST00000458706 328 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC012181.1-201ENST00000479895 423 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC118465.1-201ENST00000513820 1271 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 DNAJC19P3-201ENST00000594491 331 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 ZNF90P1-201ENST00000480493 1951 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 SAGE4P-201ENST00000442271 3381 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 MIR591-201ENST00000385290 95 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 FAT1P1-201ENST00000406588 507 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 RN7SKP223-201ENST00000410582 62 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 MTND4P11-201ENST00000417020 1058 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 USP9YP20-201ENST00000419224 558 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 NEK4P1-201ENST00000433383 879 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC112220.1-201ENST00000434628 355 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AL513043.1-201ENST00000439124 535 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 SLC31A1P1-201ENST00000451221 567 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC107016.2-201ENST00000547968 190 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC88CQ9P219 NF1P5-201ENST00000588287 448 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC006116.7-201ENST00000590141 756 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC016877.3-201ENST00000606778 504 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC015726.3-201ENST00000624501 418 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 AC084035.1-201ENST00000634543 607 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 ELF2P3-201ENST00000445099 1506 ntBASIC2.51□□□□□ -2.01
CCDC88CQ9P219 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 RPL9P7-201ENST00000330965 580 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AL672167.1-206ENST00000356293 943 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 SNORA31-201ENST00000362607 130 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 RNU6-618P-201ENST00000363518 112 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 RNA5SP210-201ENST00000391034 120 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 Z99127.2-201ENST00000441426 334 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 RPL7P59-201ENST00000447700 943 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 RPS3P1-201ENST00000456781 192 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 RPL31P13-201ENST00000484151 370 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AC096725.1-201ENST00000514266 313 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 SNORA9.3-201ENST00000516383 129 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 RNA5SP148-201ENST00000516527 94 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms