Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.95□□□□□ -1.62
TRIM39Q9HCM9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM39Q9HCM9 AL138713.1-201ENST00000624026 2130 ntBASIC4.95□□□□□ -1.62
TRIM39Q9HCM9 AL353662.3-201ENST00000625131 237 ntBASIC4.95□□□□□ -1.62
TRIM39Q9HCM9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM39Q9HCM9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM39Q9HCM9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM39Q9HCM9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC087190.4-201ENST00000574616 8334 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RN7SKP104-201ENST00000362605 328 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RNU6-989P-201ENST00000362756 107 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RNU6-534P-201ENST00000364877 106 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RNY3P13-201ENST00000365542 102 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RNU1-39P-201ENST00000383897 165 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 MIR19A-201ENST00000384878 82 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 CHEK2P3-201ENST00000416118 248 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 ZNF90P2-204ENST00000419323 1075 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AL109913.1-201ENST00000421173 514 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 CHIAP3-201ENST00000423668 1133 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC007283.2-201ENST00000424739 197 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 CKS1BP5-201ENST00000434172 273 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RPL35AP22-201ENST00000436855 335 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 PRPF38AP2-201ENST00000438179 851 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RPL7P54-201ENST00000438336 674 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RPL12P3-201ENST00000440080 396 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 CALM1P1-201ENST00000442082 433 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RPL7AP61-201ENST00000443410 636 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 CEACAMP6-201ENST00000452007 574 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 RNU6-798P-201ENST00000516912 103 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC008033.2-201ENST00000542626 177 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC006349.1-201ENST00000555526 235 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 MIR4443-201ENST00000585052 53 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 SLC25A36P1-201ENST00000590111 465 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AL512782.1-201ENST00000603093 364 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 LLPHP1-201ENST00000603571 367 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AP001521.2-201ENST00000608772 546 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC245517.5-201ENST00000611529 162 ntBASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM39Q9HCM9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 NXPH1-205ENST00000602349 1953 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 Y_RNA.159-201ENST00000363674 87 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 RNU6-169P-201ENST00000365336 107 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 SNORA51.8-201ENST00000384234 132 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 SNORA70.10-201ENST00000384515 134 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 MIR550A3-201ENST00000390735 95 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 RNU6-837P-201ENST00000391056 108 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 CYB5AP4-201ENST00000396692 399 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 MRPL50P2-201ENST00000416821 482 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 AF186996.5-201ENST00000418098 904 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 TPT1P14-201ENST00000448018 505 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 RPS17P13-201ENST00000448974 407 ntBASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM39Q9HCM9 AC234775.1-201ENST00000454247 670 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms