Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SMARCE1P4-201ENST00000523647 241 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AP001207.1-201ENST00000524051 481 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AC009063.1-201ENST00000563342 702 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 OR4K7P-201ENST00000580232 945 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AL390838.2-201ENST00000602394 274 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AP004247.3-201ENST00000608682 624 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 MIR6500-201ENST00000622700 86 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AC097504.1-201ENST00000515103 2415 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 USP9YP4-201ENST00000424401 1745 ntBASIC4.28□□□□□ -1.72
EBF3Q9H4W6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.28□□□□□ -1.72
EBF3Q9H4W6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC116667.1-201ENST00000604855 2072 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 RNA5SP502-201ENST00000362694 119 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 MIR217-201ENST00000384817 110 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 NCSTNP1-201ENST00000406229 144 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 RPS23P10-201ENST00000416185 486 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL161631.1-201ENST00000417933 486 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 Z93242.1-201ENST00000427102 353 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 MTCO3P21-201ENST00000430791 643 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 MTND3P23-201ENST00000431980 347 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 SEPT7P5-201ENST00000434048 306 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC098614.3-201ENST00000438957 440 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL592447.1-201ENST00000447592 540 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC092001.1-201ENST00000453012 261 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 RPL38P1-201ENST00000460914 211 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC004924.1-201ENST00000480160 781 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC108471.1-201ENST00000513977 287 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 RNU6-1225P-201ENST00000516336 65 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 RN7SKP244-201ENST00000516513 307 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC118273.2-201ENST00000532092 465 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL121579.1-201ENST00000555129 305 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL136981.2-201ENST00000617319 734 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 MIR7151-201ENST00000617477 60 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC112200.1-201ENST00000625015 234 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AC127502.3-201ENST00000636170 1206 ntBASIC4.27□□□□□ -1.73
EBF3Q9H4W6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EBF3Q9H4W6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 DCAF13P3-201ENST00000561147 1334 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AC109315.1-201ENST00000584143 1347 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 Z99496.1-201ENST00000469424 1477 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 RNU6-839P-201ENST00000363347 108 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 Y_RNA.813-201ENST00000364639 102 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 RNU6-761P-201ENST00000384148 107 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 RNY3P10-201ENST00000384764 102 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 MIR708-201ENST00000390708 88 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 HSPE1P12-201ENST00000412576 301 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AL391219.1-201ENST00000422570 483 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms