Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC068538.1-201ENST00000376856 336 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 SNORD21-201ENST00000383953 95 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 RNU6-339P-201ENST00000384310 107 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AL353692.2-201ENST00000407054 335 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 SNORA11C-201ENST00000408532 129 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 ARL2BPP3-201ENST00000421226 480 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 BRWD1P3-201ENST00000428816 390 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 ZNF965P-201ENST00000432501 817 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC073063.1-201ENST00000434352 607 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC114878.1-201ENST00000441166 358 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 UBBP3-201ENST00000445497 241 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 Z96811.1-201ENST00000445880 108 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 MTND1P33-201ENST00000446251 917 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 RPL23AP23-201ENST00000452590 471 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 snoU13.4-201ENST00000458916 104 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC104472.2-201ENST00000469035 601 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC025518.1-201ENST00000479856 347 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 RPL7P38-201ENST00000488396 739 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 NPM1P41-201ENST00000512920 831 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC133963.2-201ENST00000513686 578 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 RNU1-61P-201ENST00000516107 151 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC013468.1-201ENST00000608680 598 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC068831.7-201ENST00000616954 363 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC006249.1-201ENST00000621223 471 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AC022509.4-201ENST00000621404 572 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 MIR622-201ENST00000638396 96 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AL035425.3-201ENST00000564206 4996 ntBASIC2.36□□□□□ -2.03
NKX6-2Q9C056 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RNU6-989P-201ENST00000362756 107 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RNU1-35P-201ENST00000362782 153 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RNU6-1339P-201ENST00000363574 91 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RNU6-444P-201ENST00000383988 108 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RNU6-1005P-201ENST00000384519 107 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 MIR1289-1-201ENST00000408836 144 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 HMGB3P31-201ENST00000413333 595 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 OFD1P18Y-201ENST00000420889 959 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AL513175.2-201ENST00000422071 443 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 HSFY1P1-201ENST00000423928 1178 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AL590623.1-201ENST00000427864 105 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 OR51B8P-201ENST00000449892 769 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RPS23P3-201ENST00000470993 430 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC010301.1-201ENST00000473936 355 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RPS27P23-201ENST00000487608 251 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 SNORA9.3-201ENST00000516383 129 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 SNORA31.11-201ENST00000516528 139 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC019227.1-201ENST00000526902 510 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC027104.1-201ENST00000563702 681 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 TPMTP1-201ENST00000592307 737 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC092474.3-201ENST00000603022 568 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC008962.1-201ENST00000605729 304 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC090115.4-201ENST00000609970 188 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AL110115.1-201ENST00000614396 364 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 ZYXP1-201ENST00000617638 118 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC018755.4-201ENST00000619715 454 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms