Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC091905.2-201ENST00000623143 306 ntBASIC3.1□□□□□ -1.91
LITAFQ99732 CR381572.1-201ENST00000625098 102 ntBASIC3.1□□□□□ -1.91
LITAFQ99732 AL353662.3-201ENST00000625131 237 ntBASIC3.1□□□□□ -1.91
LITAFQ99732 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.1□□□□□ -1.91
LITAFQ99732 AP001052.1-201ENST00000626421 99 ntBASIC3.1□□□□□ -1.91
LITAFQ99732 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.1□□□□□ -1.91
LITAFQ99732 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LITAFQ99732 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LITAFQ99732 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.1□□□□□ -1.91
LITAFQ99732 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LITAFQ99732 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LITAFQ99732 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LITAFQ99732 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LITAFQ99732 AC009902.3-201ENST00000606235 2172 ntBASIC3.1□□□□□ -1.91
LITAFQ99732 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AL450326.2-201ENST00000421913 1962 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LITAFQ99732 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LITAFQ99732 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 OR52B1P-201ENST00000316506 909 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LITAFQ99732 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 Y_RNA.481-201ENST00000384373 102 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LITAFQ99732 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LITAFQ99732 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 RNA5SP231-201ENST00000410496 138 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 JKAMPP1-201ENST00000413804 919 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AC007283.2-201ENST00000424739 197 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LITAFQ99732 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.09□□□□□ -1.91
LITAFQ99732 AC012075.1-201ENST00000436549 580 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 UBE2V1P13-201ENST00000436983 439 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.09□□□□□ -1.91
LITAFQ99732 RPL34P20-201ENST00000442771 351 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LITAFQ99732 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LITAFQ99732 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 RPS20P24-201ENST00000457473 361 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AC009127.1-201ENST00000467090 155 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 AC079382.1-201ENST00000493346 557 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AC025164.1-201ENST00000496249 478 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LITAFQ99732 AC098799.2-201ENST00000509466 868 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 RNU6-27P-201ENST00000516146 107 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 SNORA20.3-201ENST00000516880 132 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LITAFQ99732 BRD9P1-201ENST00000529855 560 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.09□□□□□ -1.91
LITAFQ99732 AC026826.3-201ENST00000561747 158 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.09□□□□□ -1.91
LITAFQ99732 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.09□□□□□ -1.91
LITAFQ99732 MIR3146-201ENST00000580367 79 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 BNIP3P33-201ENST00000598912 569 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AC068790.3-201ENST00000602988 553 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AL049829.3-202ENST00000604278 711 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AP001330.5-201ENST00000607176 411 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 AL020991.1-201ENST00000612314 373 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.09□□□□□ -1.91
LITAFQ99732 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.09□□□□□ -1.91
LITAFQ99732 CASC19-264ENST00000641912 1184 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.09□□□□□ -1.91
LITAFQ99732 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.09□□□□□ -1.91
LITAFQ99732 AL136164.3-201ENST00000624429 3978 ntBASIC3.09□□□□□ -1.91
LITAFQ99732 CASC19-280ENST00000642102 1351 ntBASIC3.09□□□□□ -1.92
LITAFQ99732 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
LITAFQ99732 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LITAFQ99732 AC010928.1-201ENST00000592477 1447 ntBASIC3.09□□□□□ -1.92
LITAFQ99732 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LITAFQ99732 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LITAFQ99732 ZFRP1-201ENST00000457579 2970 ntBASIC3.09□□□□□ -1.92
LITAFQ99732 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LITAFQ99732 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LITAFQ99732 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LITAFQ99732 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LITAFQ99732 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LITAFQ99732 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
LITAFQ99732 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LITAFQ99732 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.08□□□□□ -1.92
LITAFQ99732 AC090971.4-201ENST00000560291 1800 ntBASIC3.08□□□□□ -1.92
LITAFQ99732 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LITAFQ99732 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LITAFQ99732 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LITAFQ99732 Y_RNA.70-201ENST00000362886 110 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms