Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC233982.1-201ENST00000451247 436 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AP001992.1-205ENST00000462248 379 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 SYPL1P1-201ENST00000473622 768 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AC108860.1-201ENST00000484521 383 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.95□□□□□ -1.94
VAT1Q99536 IGKV2D-36-201ENST00000518643 226 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AC083923.1-201ENST00000523708 376 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.95□□□□□ -1.94
VAT1Q99536 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.95□□□□□ -1.94
VAT1Q99536 AL163153.1-201ENST00000554223 283 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 EIF5A2P1-201ENST00000564027 460 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 MIR5195-201ENST00000583555 115 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.95□□□□□ -1.94
VAT1Q99536 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.95□□□□□ -1.94
VAT1Q99536 AC083760.1-201ENST00000589621 670 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AC125494.3-201ENST00000602759 455 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AL020991.1-201ENST00000612314 373 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AL392048.1-201ENST00000613946 534 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 STMN1P1-201ENST00000617809 440 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 MIR3651-201ENST00000630427 90 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.95□□□□□ -1.94
VAT1Q99536 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VAT1Q99536 AL136164.4-201ENST00000625013 2135 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VAT1Q99536 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VAT1Q99536 AC073346.2-201ENST00000624724 2058 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.94□□□□□ -1.94
VAT1Q99536 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 SNORD51.1-201ENST00000365405 77 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VAT1Q99536 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VAT1Q99536 RPL23AP47-201ENST00000408017 460 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 MIR1250-201ENST00000408098 113 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.94□□□□□ -1.94
VAT1Q99536 AC092745.2-202ENST00000411880 369 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.94□□□□□ -1.94
VAT1Q99536 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.94□□□□□ -1.94
VAT1Q99536 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.94□□□□□ -1.94
VAT1Q99536 RPL7P46-201ENST00000425129 740 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AC104308.1-201ENST00000454621 333 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.94□□□□□ -1.94
VAT1Q99536 RPL5P24-201ENST00000463742 885 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AC012181.1-201ENST00000479895 423 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 HMGB1P22-201ENST00000505315 124 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.94□□□□□ -1.94
VAT1Q99536 AC117522.3-201ENST00000507974 584 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 RNU6-1073P-201ENST00000517182 106 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.94□□□□□ -1.94
VAT1Q99536 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.94□□□□□ -1.94
VAT1Q99536 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.94□□□□□ -1.94
VAT1Q99536 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.94□□□□□ -1.94
VAT1Q99536 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.94□□□□□ -1.94
VAT1Q99536 AC006504.3-201ENST00000586818 523 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AC091488.1-201ENST00000604239 660 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AC016877.3-201ENST00000606778 504 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.94□□□□□ -1.94
VAT1Q99536 AC006023.2-201ENST00000609916 167 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AL590240.3-201ENST00000621416 943 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AC024595.1-201ENST00000623088 387 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 AC009039.2-201ENST00000624524 529 ntBASIC2.94□□□□□ -1.94
VAT1Q99536 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.94□□□□□ -1.94
VAT1Q99536 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VAT1Q99536 AP001350.1-201ENST00000601906 1524 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VAT1Q99536 AC007256.1-201ENST00000392253 2765 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VAT1Q99536 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.93□□□□□ -1.94
VAT1Q99536 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VAT1Q99536 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VAT1Q99536 SNORD46.1-201ENST00000364139 104 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 RNU1-140P-201ENST00000365040 165 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.93□□□□□ -1.94
VAT1Q99536 SNORA11C-201ENST00000408532 129 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.93□□□□□ -1.94
VAT1Q99536 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 RPL21P66-201ENST00000426566 466 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AL451062.2-201ENST00000427515 271 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.93□□□□□ -1.94
VAT1Q99536 AC022018.1-201ENST00000430685 241 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 RPS29P6-201ENST00000438196 145 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AC114878.1-201ENST00000441166 358 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.93□□□□□ -1.94
VAT1Q99536 AC034236.1-201ENST00000469891 373 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AC017015.1-201ENST00000477387 286 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AC006483.1-201ENST00000487308 313 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 SCARNA13-201ENST00000516672 275 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.93□□□□□ -1.94
VAT1Q99536 AP001207.1-201ENST00000524051 481 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.93□□□□□ -1.94
VAT1Q99536 AC027104.1-201ENST00000563702 681 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AC107954.1-201ENST00000565906 727 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 MIR4474-201ENST00000579189 78 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 BX322635.1-201ENST00000605804 496 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AC004832.5-201ENST00000608677 401 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
VAT1Q99536 AC020923.1-201ENST00000624021 917 ntBASIC2.93□□□□□ -1.94
VAT1Q99536 AC104820.1-201ENST00000624183 307 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms