Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX18Q96RF0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 MIR4330-201ENST00000579077 105 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC092954.2-201ENST00000609103 430 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 RN7SL722P-201ENST00000617780 284 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 RN7SL565P-201ENST00000618246 284 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL445264.1-201ENST00000621719 171 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 MIR6863-201ENST00000636112 90 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 FAM157B-203ENST00000639350 358 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX18Q96RF0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX18Q96RF0 ERCC6-202ENST00000374127 1782 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX18Q96RF0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC114546.3-201ENST00000623582 1734 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC011978.2-201ENST00000569835 2054 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 CR848007.1-201ENST00000442354 1699 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 RNU6-343P-201ENST00000364709 104 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 Y_RNA.372-201ENST00000365599 102 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 Y_RNA.390-201ENST00000383932 102 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 RNU6-195P-201ENST00000411352 109 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 SPA17P1-201ENST00000416656 452 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 RPS15AP40-201ENST00000419621 391 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 MTCO2P5-201ENST00000422621 426 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 USP9YP9-201ENST00000429406 715 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 AL451074.3-201ENST00000437709 472 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 RPL22P17-201ENST00000438729 315 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 RABEPKP1-201ENST00000440529 1026 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 WASF1P1-201ENST00000447560 1131 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AP000542.1-201ENST00000448473 371 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 RN7SL738P-201ENST00000470264 297 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC104563.1-201ENST00000476147 376 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC012158.1-204ENST00000483430 465 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC146944.2-203ENST00000502493 354 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC139783.2-201ENST00000504847 1145 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 PRDX4P1-201ENST00000507189 574 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC008549.1-201ENST00000512900 643 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC139495.1-202ENST00000513164 354 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 RNA5SP497-201ENST00000516081 97 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AP003467.2-201ENST00000520175 319 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 AL157394.1-201ENST00000562983 1224 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC015912.2-201ENST00000571053 181 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC136475.10-201ENST00000620253 385 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC009318.4-201ENST00000620496 486 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC015908.5-201ENST00000623289 343 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 AC095050.2-201ENST00000510748 1458 ntBASIC4.23□□□□□ -1.73
SNX18Q96RF0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SNX18Q96RF0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX18Q96RF0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 MIR513A2-201ENST00000385249 127 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 GSTA9P-201ENST00000406231 611 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL590002.1-201ENST00000406554 418 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 RAP1BP3-201ENST00000407180 549 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms