Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AL445493.3-201ENST00000619568 477 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 AC020923.1-201ENST00000624021 917 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 AL356094.1-201ENST00000624663 1212 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CCDC7Q96M83 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC7Q96M83 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC7Q96M83 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC7Q96M83 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC7Q96M83 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC7Q96M83 ATF1P1-201ENST00000406040 927 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 MTATP6P31-201ENST00000406985 692 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC019097.1-201ENST00000424783 735 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 AL031736.2-201ENST00000426573 787 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC7Q96M83 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC126121.1-201ENST00000482313 553 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 DYNLL1P6-201ENST00000503440 264 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 CYCSP39-201ENST00000565821 309 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC079148.1-201ENST00000565944 819 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC138761.3-201ENST00000579993 334 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC104984.5-201ENST00000586878 94 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC024153.1-201ENST00000603103 365 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC107294.3-201ENST00000609211 526 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC010338.1-201ENST00000621823 717 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC7Q96M83 AC000123.2-201ENST00000623124 461 ntBASIC3.97□□□□□ -1.77
CCDC7Q96M83 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC7Q96M83 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC7Q96M83 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC7Q96M83 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC7Q96M83 ASNSP3-201ENST00000451989 1306 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC7Q96M83 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC7Q96M83 AL590004.2-201ENST00000404787 371 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 USP9YP19-201ENST00000412165 485 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 PTP4A1P5-201ENST00000420305 455 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 RPL30P3-201ENST00000424262 333 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 AC063976.3-201ENST00000426849 329 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC7Q96M83 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC7Q96M83 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC7Q96M83 RPL29P29-201ENST00000448725 423 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 RPL30P11-201ENST00000495304 339 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC7Q96M83 AC133963.2-201ENST00000513686 578 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC7Q96M83 AC107016.2-201ENST00000547968 190 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC7Q96M83 AL845331.3-202ENST00000562856 261 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 AC090115.4-201ENST00000609970 188 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 IGHVIII-44-202ENST00000636235 289 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC7Q96M83 U6.107-201ENST00000637108 79 ntBASIC3.96□□□□□ -1.78
CCDC7Q96M83 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC7Q96M83 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
CCDC7Q96M83 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC7Q96M83 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC7Q96M83 ZNF542P-204ENST00000482727 1305 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 AC092435.3-201ENST00000565538 3654 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 MIR512-1-201ENST00000384913 84 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 VN1R42P-201ENST00000424651 344 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 Z93242.1-201ENST00000427102 353 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 RPL17P35-201ENST00000432217 549 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 AC244505.4-201ENST00000434905 287 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 AC009969.1-201ENST00000438726 172 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 SSXP5-201ENST00000443473 287 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 VTA1P2-201ENST00000520205 911 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 AC090819.1-201ENST00000523800 1111 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 AC069304.3-201ENST00000603938 1084 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 MIR6715A-201ENST00000615929 79 ntBASIC3.95□□□□□ -1.78
CCDC7Q96M83 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC7Q96M83 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC7Q96M83 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC7Q96M83 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC7Q96M83 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC7Q96M83 RNU6-792P-201ENST00000363490 107 ntBASIC3.94□□□□□ -1.78
CCDC7Q96M83 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC7Q96M83 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.94□□□□□ -1.78
CCDC7Q96M83 RPL7P31-201ENST00000450192 724 ntBASIC3.94□□□□□ -1.78
CCDC7Q96M83 MTCO1P18-201ENST00000455518 1419 ntBASIC3.94□□□□□ -1.78
CCDC7Q96M83 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC7Q96M83 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC7Q96M83 AC111000.2-201ENST00000507775 550 ntBASIC3.94□□□□□ -1.78
CCDC7Q96M83 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC7Q96M83 COX6B1P6-201ENST00000522347 255 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms