Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 RN7SKP266-201ENST00000410232 287 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AL663109.1-201ENST00000411498 844 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 MTCO2P5-201ENST00000422621 426 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 OR51AB1P-201ENST00000429046 620 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 RPL37P21-201ENST00000435890 276 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 BX322784.1-201ENST00000455793 1077 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 CFTRP1-201ENST00000456646 183 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 RPL31P50-201ENST00000471002 296 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 COX6CP8-201ENST00000522620 226 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AC091178.1-203ENST00000584586 279 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AL353600.1-201ENST00000608148 251 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AC104073.3-201ENST00000610942 955 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AC019176.2-201ENST00000611579 315 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AL357080.1-201ENST00000617394 239 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 MIR7151-201ENST00000617477 60 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AL731532.2-201ENST00000623542 1953 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 RNU6-213P-201ENST00000384051 104 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 RNU6-878P-201ENST00000384578 110 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 RPL31P1-201ENST00000398116 372 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 MIR1305-201ENST00000408300 86 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 MTATP6P27-201ENST00000416987 621 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 UBTFL3-201ENST00000418934 1024 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 GLRXP1-201ENST00000423261 334 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AL162388.1-201ENST00000450912 352 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 SSXP1-201ENST00000453640 473 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 RPL7P15-201ENST00000461190 712 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC104563.1-201ENST00000476147 376 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 UBTFL6-201ENST00000477929 1024 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC022447.3-201ENST00000506865 495 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC113430.1-201ENST00000506872 718 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 MTCO2P32-201ENST00000514865 403 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 OR5AP1P-201ENST00000529730 940 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC005951.1-201ENST00000576706 485 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC005255.1-201ENST00000593748 216 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AP000403.1-201ENST00000603349 851 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AL160290.3-201ENST00000604869 165 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC093591.3-201ENST00000634516 308 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 OR11H5P-202ENST00000641612 1325 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 AC024560.2-201ENST00000507981 1497 ntBASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM43Q96BQ3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 RNU4-75P-201ENST00000364621 146 ntBASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 RNA5SP151-201ENST00000365632 117 ntBASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 HSPD1P16-201ENST00000402302 394 ntBASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 CYCSP10-201ENST00000417973 294 ntBASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 AC012065.2-201ENST00000421295 375 ntBASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 RPL21P91-201ENST00000429231 479 ntBASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 RPEP2-201ENST00000432149 701 ntBASIC4.6□□□□□ -1.67
TRIM43Q96BQ3 USP9YP29-201ENST00000445112 563 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms