Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC092427.1-201ENST00000439177 601 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 MTCO1P48-201ENST00000448024 1096 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AC097493.1-201ENST00000463958 372 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AP000797.1-201ENST00000478870 387 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 RN7SL809P-201ENST00000482040 297 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.32□□□□□ -1.56
RTF1Q92541 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.32□□□□□ -1.56
RTF1Q92541 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.32□□□□□ -1.56
RTF1Q92541 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTF1Q92541 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.32□□□□□ -1.56
RTF1Q92541 RNU7-143P-201ENST00000516781 65 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.32□□□□□ -1.56
RTF1Q92541 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
RTF1Q92541 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.32□□□□□ -1.56
RTF1Q92541 AC074029.1-201ENST00000552531 1044 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.32□□□□□ -1.56
RTF1Q92541 ZNF519P3-201ENST00000557158 1032 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AC120057.2-201ENST00000571520 271 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.32□□□□□ -1.56
RTF1Q92541 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.32□□□□□ -1.56
RTF1Q92541 AC110743.1-201ENST00000584870 478 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.32□□□□□ -1.56
RTF1Q92541 AC064801.1-201ENST00000612025 407 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AL589743.7-201ENST00000612637 233 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 AC243773.3-201ENST00000613270 256 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.32□□□□□ -1.56
RTF1Q92541 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.32□□□□□ -1.56
RTF1Q92541 AC055839.1-201ENST00000634467 498 ntBASIC5.32□□□□□ -1.56
RTF1Q92541 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTF1Q92541 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.32□□□□□ -1.56
RTF1Q92541 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.32□□□□□ -1.56
RTF1Q92541 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.32□□□□□ -1.56
RTF1Q92541 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RTF1Q92541 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTF1Q92541 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTF1Q92541 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.31□□□□□ -1.56
RTF1Q92541 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTF1Q92541 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RTF1Q92541 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RTF1Q92541 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.31□□□□□ -1.56
RTF1Q92541 OR4A15-201ENST00000314706 1035 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 RNU5F-6P-201ENST00000362979 116 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.31□□□□□ -1.56
RTF1Q92541 MIR134-201ENST00000385258 73 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 MIR92A2-201ENST00000385299 75 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTF1Q92541 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RTF1Q92541 HMGB1P11-201ENST00000413899 637 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 PRELID3BP11-201ENST00000414230 479 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 RPL36AP36-201ENST00000418616 301 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 FNDC3CP-201ENST00000420795 1155 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 NPM1P24-201ENST00000428039 894 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.31□□□□□ -1.56
RTF1Q92541 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 AC239367.2-201ENST00000447309 705 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.31□□□□□ -1.56
RTF1Q92541 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RTF1Q92541 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.31□□□□□ -1.56
RTF1Q92541 RNU6-1178P-201ENST00000516674 107 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.31□□□□□ -1.56
RTF1Q92541 OR4A45P-201ENST00000529954 901 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 AC016957.1-201ENST00000534895 309 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.31□□□□□ -1.56
RTF1Q92541 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.31□□□□□ -1.56
RTF1Q92541 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 RN7SL703P-201ENST00000578485 302 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.31□□□□□ -1.56
RTF1Q92541 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTF1Q92541 AP000403.1-201ENST00000603349 851 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 AC112187.2-201ENST00000604345 283 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTF1Q92541 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 AC099654.12-201ENST00000639868 649 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTF1Q92541 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTF1Q92541 AC105074.1-201ENST00000623380 3095 ntBASIC5.31□□□□□ -1.56
RTF1Q92541 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.31□□□□□ -1.56
RTF1Q92541 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RTF1Q92541 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RTF1Q92541 MTND4P16-201ENST00000466108 1367 ntBASIC5.3□□□□□ -1.56
RTF1Q92541 FAM91A3P-201ENST00000456826 2544 ntBASIC5.3□□□□□ -1.56
RTF1Q92541 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTF1Q92541 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.3□□□□□ -1.56
RTF1Q92541 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RTF1Q92541 RNU6-657P-201ENST00000383904 107 ntBASIC5.3□□□□□ -1.56
RTF1Q92541 RNU6-178P-201ENST00000384631 104 ntBASIC5.3□□□□□ -1.56
RTF1Q92541 RPL32P23-201ENST00000397237 405 ntBASIC5.3□□□□□ -1.56
RTF1Q92541 RPS24P12-201ENST00000402084 394 ntBASIC5.3□□□□□ -1.56
RTF1Q92541 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.3□□□□□ -1.56
RTF1Q92541 AC091862.1-201ENST00000438016 1100 ntBASIC5.3□□□□□ -1.56
RTF1Q92541 RPS29P7-201ENST00000439662 171 ntBASIC5.3□□□□□ -1.56
RTF1Q92541 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms