Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SNRPEP2-201ENST00000397592 279 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 CYCSP45-201ENST00000402289 315 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 SSXP10-201ENST00000402595 565 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 SNORA3.3-201ENST00000408712 125 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 RN7SKP202-201ENST00000410439 330 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 RN7SKP177-201ENST00000410567 355 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 RN7SKP159-201ENST00000410657 292 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AMD1P2-201ENST00000412936 992 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 RPS15AP40-201ENST00000419621 391 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 OR4F13P-201ENST00000428478 931 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 NPM1P34-201ENST00000428821 893 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC122718.1-201ENST00000439448 744 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 UBE2D3P4-201ENST00000441973 436 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 KATNBL1P3-201ENST00000443475 909 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 RPL39P6-201ENST00000448289 150 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 USP9YP10-201ENST00000454868 628 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 TRBV26-201ENST00000456572 344 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 FAM133DP-201ENST00000464802 691 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 HMGB1P21-201ENST00000502313 581 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC005178.1-201ENST00000508392 440 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 USP9YP5-201ENST00000511770 630 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC016065.2-201ENST00000514530 444 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 RNA5SP143-201ENST00000516936 115 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC110741.2-201ENST00000605278 268 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 MIR486-1-201ENST00000612171 68 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC243773.3-201ENST00000613270 256 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC073530.2-201ENST00000623987 261 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC004777.1-201ENST00000624317 287 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 FAM157B-203ENST00000639350 358 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AL513185.3-201ENST00000433335 1300 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AL122126.1-201ENST00000546905 1318 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 AC011477.1-204ENST00000623416 1325 ntBASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH20Q8N6Y1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AL079343.1-201ENST00000572358 1771 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 MTCO1P14-201ENST00000441695 1559 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 MIR199A2-201ENST00000385289 110 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 RPL32P23-201ENST00000397237 405 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 RN7SKP56-201ENST00000410513 331 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AL953862.1-201ENST00000423016 168 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC010342.1-201ENST00000514047 877 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 DEFB131D-201ENST00000526803 184 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 OR7K1P-201ENST00000546439 926 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC007954.1-201ENST00000554198 494 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 CYCSP2-201ENST00000558168 301 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC020914.6-201ENST00000594327 272 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC004987.4-201ENST00000603383 338 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AC034229.5-201ENST00000624258 185 ntBASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PCDH20Q8N6Y1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms