Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC021242.1-201ENST00000507315 2035 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE4Q8N205 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE4Q8N205 RNU5D-1-201ENST00000363299 116 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 RNU4-91P-201ENST00000364778 135 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 MIR634-201ENST00000385208 97 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AL590290.1-201ENST00000405336 380 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 RNU2-6P-201ENST00000411404 190 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC068533.2-201ENST00000411872 306 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 RPL23AP39-201ENST00000415533 405 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 USP9YP18-201ENST00000425912 695 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 NPM1P34-201ENST00000428821 893 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AL512286.1-201ENST00000439244 400 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 FTH1P25-201ENST00000447665 469 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC104306.1-201ENST00000449702 371 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC005229.2-201ENST00000456995 399 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 RPL23AP12-201ENST00000467573 473 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 TMED11P-201ENST00000479478 690 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC012158.1-204ENST00000483430 465 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 DEFB109F-201ENST00000491870 277 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC116347.2-201ENST00000514912 523 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 RNY4P37-201ENST00000516225 96 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC090751.1-201ENST00000566966 267 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 SNORA59B-202ENST00000578183 701 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AL137072.1-201ENST00000603444 466 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AL390816.3-201ENST00000604527 1066 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AP003117.2-201ENST00000606010 545 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 AL158211.4-201ENST00000606988 584 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE4Q8N205 CR383658.2-201ENST00000547576 1525 ntBASIC5.01□□□□□ -1.61
SYNE4Q8N205 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.01□□□□□ -1.61
SYNE4Q8N205 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE4Q8N205 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE4Q8N205 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SYNE4Q8N205 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5□□□□□ -1.61
SYNE4Q8N205 AC073346.2-201ENST00000624724 2058 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SYNE4Q8N205 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE4Q8N205 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE4Q8N205 RNU6-619P-201ENST00000365146 108 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5□□□□□ -1.61
SYNE4Q8N205 ISCA1P1-201ENST00000426679 387 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 AC073335.1-201ENST00000427776 363 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 OFD1P12Y-201ENST00000427963 1207 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 SKP1P3-201ENST00000429280 487 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5□□□□□ -1.61
SYNE4Q8N205 RPS24P8-201ENST00000431490 402 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5□□□□□ -1.61
SYNE4Q8N205 PDSS1P2-201ENST00000449397 678 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 NANOGP10-201ENST00000453325 895 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 PNPLA4P1-201ENST00000458328 305 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5□□□□□ -1.61
SYNE4Q8N205 AC015724.1-201ENST00000478577 156 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 PPIAP15-201ENST00000479662 484 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 RPL9P6-201ENST00000492764 598 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5□□□□□ -1.61
SYNE4Q8N205 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5□□□□□ -1.61
SYNE4Q8N205 AC007991.1-201ENST00000522680 631 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNE4Q8N205 AC037471.2-201ENST00000564941 598 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 MIR4472-2-201ENST00000582069 67 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5□□□□□ -1.61
SYNE4Q8N205 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5□□□□□ -1.61
SYNE4Q8N205 AC133552.5-201ENST00000604266 540 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5□□□□□ -1.61
SYNE4Q8N205 AC007742.2-201ENST00000618226 398 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 AC018926.3-201ENST00000618841 406 ntBASIC5□□□□□ -1.61
SYNE4Q8N205 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
SYNE4Q8N205 FAM157B-203ENST00000639350 358 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms