Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 EXOC5P1-201ENST00000510543 1969 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 RNU1-18P-201ENST00000363062 164 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 Y_RNA.311-201ENST00000365068 96 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 SNORD3H-201ENST00000384486 214 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 RNU6-1242P-201ENST00000391052 103 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 SNORA3.3-201ENST00000408712 125 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 SNORA57.3-201ENST00000411095 141 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 MTATP6P27-201ENST00000416987 621 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 PTP4A1P5-201ENST00000420305 455 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 MTND2P9-201ENST00000422293 931 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AL445584.1-201ENST00000431451 330 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 HSPE1P28-201ENST00000443139 211 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 RANP8-201ENST00000444720 713 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 RPL18AP17-201ENST00000455326 198 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 RN7SL93P-201ENST00000463035 293 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 RPS4XP10-201ENST00000465034 731 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 HMGB1P25-201ENST00000468402 607 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 PPIAP15-201ENST00000479662 484 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 MTCO3P35-201ENST00000485582 781 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 ACTG1P13-201ENST00000486987 1043 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 RN7SL323P-201ENST00000494712 295 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC090453.1-201ENST00000495560 436 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC079395.1-201ENST00000510981 262 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 RN7SKP289-201ENST00000517244 295 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 PAICSP4-201ENST00000517543 1253 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC092851.1-201ENST00000535964 478 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC087481.2-201ENST00000565492 330 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC053481.3-201ENST00000577881 843 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC004009.2-201ENST00000623016 728 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AL078595.3-201ENST00000623815 1166 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC073530.2-201ENST00000623987 261 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 LINC00561-201ENST00000565815 2738 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AP002001.2-201ENST00000529025 1469 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AL390862.1-201ENST00000635467 1469 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 AP001486.2-201ENST00000561652 5113 ntBASIC3.97□□□□□ -1.77
PRPF39Q86UA1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF39Q86UA1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PRPF39Q86UA1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.96□□□□□ -1.77
PRPF39Q86UA1 AF127577.6-201ENST00000623352 2191 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 RNU6-50P-201ENST00000362356 103 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 RNA5SP129-201ENST00000410276 118 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 RN7SKP156-201ENST00000410308 342 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 HMGB1P12-201ENST00000438594 598 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AL606517.1-201ENST00000446914 387 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AL133547.1-201ENST00000448546 220 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 TRGVB-201ENST00000453257 471 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 SUMO2P2-201ENST00000456482 255 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 RPL21P11-201ENST00000461458 483 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 RPL7P38-201ENST00000488396 739 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AL024509.2-201ENST00000493462 493 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 MLLT10P2-201ENST00000506434 249 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 MTCO2P32-201ENST00000514865 403 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AC009712.1-201ENST00000564938 316 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 MIR5186-201ENST00000577504 120 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AC022662.1-201ENST00000580252 331 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 CCDC58P3-201ENST00000590792 430 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AC015726.1-201ENST00000602353 681 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AC012669.1-201ENST00000603209 283 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms