Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC004987.3-201ENST00000413879 771 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 MTCO3P20-201ENST00000454926 688 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RN7SL633P-201ENST00000488974 297 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 PDCL2P2-201ENST00000533651 189 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AC104237.2-201ENST00000612456 443 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 U4.3-201ENST00000621047 82 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AC107021.2-201ENST00000567714 2095 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RPL21P75-201ENST00000396599 483 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RPL21P1-201ENST00000399532 476 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RPL21P28-201ENST00000401418 483 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AL592114.1-201ENST00000403842 483 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AL353705.4-201ENST00000449661 238 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RPL21P16-201ENST00000495531 483 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RNA5SP281-201ENST00000516504 135 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RN7SKP219-201ENST00000516825 296 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RNA5SP380-201ENST00000517190 98 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AC025881.1-201ENST00000518851 512 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AC025946.2-201ENST00000603398 234 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 MIR1276-201ENST00000408707 83 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 Z98742.2-201ENST00000431564 187 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 NPM1P49-201ENST00000448027 714 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC055855.1-201ENST00000489563 579 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 RPL23AP49-201ENST00000492925 468 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AP000790.1-201ENST00000528891 737 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC068313.1-201ENST00000604028 1008 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC091564.4-201ENST00000533934 2194 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AP000526.1-201ENST00000603308 1388 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC093908.1-201ENST00000623125 8092 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AL353743.4-201ENST00000422653 1547 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 NDUFA5P4-201ENST00000436704 385 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC110741.2-201ENST00000605278 268 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 RAC1P3-201ENST00000416129 580 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AC093278.1-201ENST00000494700 600 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 AP004247.3-201ENST00000608682 624 ntBASIC1.67□□□□□ -2.14
CSMD3Q7Z407 GSTA9P-201ENST00000406231 611 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 PTP4A1P7-201ENST00000423476 514 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AC108667.1-201ENST00000428618 249 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AC087385.1-201ENST00000475062 312 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AC021733.2-201ENST00000518830 497 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 EI24P2-201ENST00000397776 1076 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 RNA5SP296-201ENST00000410523 111 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AL354710.1-201ENST00000453641 246 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 RPL23AP14-201ENST00000468281 468 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 RNU6-1053P-201ENST00000515930 101 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 RN7SKP282-201ENST00000516824 299 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AL591516.1-201ENST00000611326 274 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 Z73965.1-201ENST00000623412 2297 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 MTND5P29-201ENST00000458676 1807 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AC011037.1-201ENST00000483964 558 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms