Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RC3H1Q5TC82 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AC114774.1-201ENST00000507410 1770 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 SNORD116-11-201ENST00000383882 92 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 RNU6-713P-201ENST00000384761 107 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 SNORA75.6-201ENST00000391318 127 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AL445529.1-201ENST00000398713 389 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AL031679.1-201ENST00000400616 525 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 RNU4-25P-201ENST00000410569 230 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 RNA5SP251-201ENST00000410614 137 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AL591848.1-201ENST00000413092 322 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 RPL36AP15-201ENST00000444514 266 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AC020550.1-201ENST00000447385 163 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 MTND6P5-201ENST00000448266 512 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 RPL23AP41-201ENST00000484754 458 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 MIR4775-201ENST00000581168 75 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 MIR4691-201ENST00000583764 85 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 MIR4737-201ENST00000583979 81 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AC125232.2-201ENST00000592457 143 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AP000769.2-201ENST00000602344 396 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AL008729.2-201ENST00000606393 473 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 OR6R2P-201ENST00000609216 300 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AL627230.1-201ENST00000613077 211 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AL591926.8-201ENST00000616876 211 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 PISRT1.1-201ENST00000616930 107 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AC091812.1-201ENST00000432235 1948 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 USP9YP4-201ENST00000424401 1745 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 AC233263.6-201ENST00000631132 1963 ntBASIC6.75□□□□□ -1.33
RC3H1Q5TC82 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.75□□□□□ -1.33
RC3H1Q5TC82 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 MSL3P1-202ENST00000440028 1468 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 HSPE1P11-201ENST00000339579 310 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 Y_RNA.22-201ENST00000362492 102 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 RNU6-770P-201ENST00000363929 105 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 Y_RNA.461-201ENST00000384263 103 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AL590290.1-201ENST00000405336 380 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AL034374.1-201ENST00000406329 351 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 RNU2-36P-201ENST00000410361 191 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AC092832.1-201ENST00000422934 400 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 RPS17P8-201ENST00000434525 335 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 PABPC1P3-201ENST00000469174 459 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 RN7SL188P-201ENST00000469842 285 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AL161747.1-201ENST00000480068 358 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 RNU6-470P-201ENST00000515954 104 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 SNORD116.3-201ENST00000517176 78 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AC131281.1-201ENST00000522984 164 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AP000907.2-201ENST00000530827 353 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 RPL21P12-201ENST00000559810 515 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 MIR4697-201ENST00000582977 78 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AC104687.2-201ENST00000604442 342 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AL512643.1-201ENST00000635735 524 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 U6.101-201ENST00000637707 76 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms