Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL359273.1-201ENST00000510918 627 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AP006437.1-201ENST00000641440 3685 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 OR5H15-201ENST00000383696 930 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AK6P1-201ENST00000540219 478 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL445437.1-201ENST00000623157 3087 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL391987.6-201ENST00000305671 199 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL138827.1-201ENST00000402666 306 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 SCARNA20.6-201ENST00000517251 106 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 SUB1P3-201ENST00000564581 315 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC002487.1-201ENST00000604565 994 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC093775.1-201ENST00000624154 1868 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 DDX43P2-201ENST00000604753 1354 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 Y_RNA.324-201ENST00000365165 102 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RPL7P25-201ENST00000404151 721 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 EIF4EP1-201ENST00000422311 642 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC009965.2-201ENST00000425328 970 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RNA5SP320-201ENST00000516263 124 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AL162233.1-201ENST00000620014 944 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 MTCO1P52-201ENST00000433928 531 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC105402.2-201ENST00000438503 358 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RFC5P1-201ENST00000454419 874 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC078817.1-201ENST00000492623 435 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 MIR7154-201ENST00000620673 73 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 OR6K1P-201ENST00000456766 971 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AP001086.1-201ENST00000494882 321 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RN7SKP272-201ENST00000516988 232 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 HSPE1P18-201ENST00000517602 280 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 MYL12BP1-201ENST00000569826 507 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RPL21P6-201ENST00000479171 504 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 RN7SKP24-201ENST00000515888 284 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 DUXAP5-201ENST00000529668 529 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC010872.1-201ENST00000624225 675 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 AC008133.2-201ENST00000624540 351 ntBASIC1.49□□□□□ -2.17
UBR4Q5T4S7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
UBR4Q5T4S7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AL590004.2-201ENST00000404787 371 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 RNU4-62P-201ENST00000410125 130 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AL355836.1-201ENST00000555951 870 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms