Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 ELOCP26-201ENST00000436067 329 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 RPL7P22-201ENST00000466005 733 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 LARP1BP2-201ENST00000486594 519 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 DEFB109F-201ENST00000491870 277 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AC026979.1-201ENST00000492525 396 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 RPL9P6-201ENST00000492764 598 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AC023424.2-201ENST00000493479 777 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AC083829.1-201ENST00000503756 657 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 RN7SKP122-201ENST00000515923 296 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 RNA5SP49-201ENST00000516450 115 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 MED28P5-201ENST00000528254 438 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 MIR4504-201ENST00000577413 92 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AP001180.3-201ENST00000582221 145 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AC112191.3-201ENST00000604371 277 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AC007546.1-201ENST00000619452 559 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 AC068254.2-201ENST00000623938 3577 ntBASIC5.04□□□□□ -1.6
CCDC178Q5BJE1 LINC00561-201ENST00000565815 2738 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 KPNA2P2-201ENST00000419546 1489 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 XPOTP1-201ENST00000443317 2398 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 OR4G2P-201ENST00000328113 903 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 RNU6-1283P-201ENST00000365314 105 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 MIR649-201ENST00000384843 97 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 DHFRP6-201ENST00000401776 268 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AL023807.1-201ENST00000407932 359 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 RN7SKP235-201ENST00000410662 305 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 RN7SKP167-201ENST00000411047 285 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 ISCA1P1-201ENST00000426679 387 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 UBE2V1P8-201ENST00000437166 265 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC092013.1-201ENST00000438795 332 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 MTCO1P27-201ENST00000448269 226 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 ABCF2P2-201ENST00000450549 296 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 BTF3P5-201ENST00000457252 467 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 APOOP2-201ENST00000461561 539 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 SNORA18.6-201ENST00000516792 115 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 LSM6P2-201ENST00000552208 177 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 TPRKBP2-201ENST00000565969 475 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC092325.1-201ENST00000566449 554 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC023575.1-201ENST00000580510 358 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 MIR4307-201ENST00000582802 84 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 OR4G1P-201ENST00000588632 938 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC123786.2-201ENST00000603459 275 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AL354984.3-201ENST00000604803 325 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 MIR6830-201ENST00000636015 70 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AC244258.1-201ENST00000637553 1071 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 AL022578.1-201ENST00000439330 1433 ntBASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC178Q5BJE1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 AC117529.2-201ENST00000512159 2068 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 RPL32P3-201ENST00000359025 275 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 RNA5SP502-201ENST00000362694 119 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 Y_RNA.554-201ENST00000384672 102 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 SNORD66.1-201ENST00000391230 76 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 RNU6-248P-201ENST00000410720 107 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 AC009302.1-201ENST00000417147 390 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 AL161631.1-201ENST00000417933 486 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 SKP1P1-201ENST00000438081 489 ntBASIC5.02□□□□□ -1.61
CCDC178Q5BJE1 AC073614.1-201ENST00000438690 650 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms