Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCN1BQ07699 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCN1BQ07699 AC138915.3-201ENST00000562908 1389 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN1BQ07699 TAB3P1-202ENST00000452645 1634 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN1BQ07699 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SCN1BQ07699 RNVU1-6-201ENST00000364688 164 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 MIR192-201ENST00000384915 110 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SCN1BQ07699 MIR1251-201ENST00000408552 70 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 U3.42-201ENST00000408746 214 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 RN7SKP285-201ENST00000410137 318 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 USP9YP33-201ENST00000412220 421 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AL159169.1-201ENST00000421119 127 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN1BQ07699 USP9YP35-201ENST00000435696 412 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 MTCYBP34-201ENST00000439552 670 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 AL121871.1-201ENST00000443413 436 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 MEMO1P3-201ENST00000459811 302 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 RPL23AP14-201ENST00000468281 468 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 AC091951.3-201ENST00000504093 246 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN1BQ07699 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN1BQ07699 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN1BQ07699 FABP5P12-201ENST00000515543 389 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 RN7SKP83-201ENST00000516512 178 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN1BQ07699 OR8G5-201ENST00000524943 1041 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.53□□□□□ -1.84
SCN1BQ07699 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AC010198.2-201ENST00000550612 259 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 NBEAP1-201ENST00000554452 979 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 AL121576.1-201ENST00000556055 276 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AC012417.1-201ENST00000582307 1039 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 KPNA2P3-201ENST00000584190 848 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 AC022146.1-201ENST00000595307 847 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 BRDTP1-201ENST00000605735 677 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 AL590099.1-201ENST00000615276 138 ntBASIC3.53□□□□□ -1.84
SCN1BQ07699 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN1BQ07699 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
SCN1BQ07699 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCN1BQ07699 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCN1BQ07699 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCN1BQ07699 ZNF807-201ENST00000328088 1707 ntBASIC3.53□□□□□ -1.85
SCN1BQ07699 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SCN1BQ07699 AC002546.1-201ENST00000588041 2504 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN1BQ07699 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCN1BQ07699 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCN1BQ07699 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCN1BQ07699 HLFP1-201ENST00000402375 499 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 MTCYBP38-201ENST00000417160 1123 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 RPL21P109-201ENST00000422213 475 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN1BQ07699 AC002075.2-201ENST00000425207 252 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 THAP5P1-201ENST00000439089 262 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 CBX1P1-201ENST00000440184 427 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN1BQ07699 AL138878.2-201ENST00000440581 1241 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 MTND3P1-201ENST00000441336 220 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 MTND5P14-201ENST00000441481 1267 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 snoU13.8-201ENST00000458890 104 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 RPL7L1P8-201ENST00000469911 741 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 RPL7P18-201ENST00000478965 734 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AC108860.1-201ENST00000484521 383 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AC231760.1-201ENST00000498002 260 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 AC093840.1-201ENST00000511599 336 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN1BQ07699 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.52□□□□□ -1.85
SCN1BQ07699 RNU6-415P-201ENST00000516252 97 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 IGKV2-23-201ENST00000518729 323 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SCN1BQ07699 HSPE1P5-201ENST00000561489 272 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 AC013444.2-201ENST00000603317 787 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AL450336.1-201ENST00000605180 586 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AL158042.1-201ENST00000605338 460 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AC007349.4-201ENST00000608114 532 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AC097478.2-201ENST00000610572 514 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 AP001002.2-201ENST00000625137 386 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.52□□□□□ -1.85
SCN1BQ07699 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCN1BQ07699 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN1BQ07699 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms