Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDK3Q00526 RPL21P129-201ENST00000491732 478 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 AC090453.1-201ENST00000495560 436 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 AC147055.4-201ENST00000504399 745 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK3Q00526 SNORA67.7-201ENST00000516664 135 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK3Q00526 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CDK3Q00526 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.76□□□□□ -1.81
CDK3Q00526 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.76□□□□□ -1.81
CDK3Q00526 UBE2NP1-201ENST00000545592 458 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
CDK3Q00526 AC145350.1-201ENST00000567426 208 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.76□□□□□ -1.81
CDK3Q00526 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.76□□□□□ -1.81
CDK3Q00526 MIR3158-1-201ENST00000583596 81 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CDK3Q00526 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK3Q00526 AC068790.5-201ENST00000602741 355 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK3Q00526 AC025588.4-201ENST00000615802 908 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 AC103858.2-201ENST00000621471 543 ntBASIC3.76□□□□□ -1.81
CDK3Q00526 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK3Q00526 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.76□□□□□ -1.81
CDK3Q00526 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.76□□□□□ -1.81
CDK3Q00526 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.76□□□□□ -1.81
CDK3Q00526 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK3Q00526 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK3Q00526 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK3Q00526 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK3Q00526 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 AC068254.2-201ENST00000623938 3577 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC024560.2-201ENST00000507981 1497 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.75□□□□□ -1.81
CDK3Q00526 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDK3Q00526 AL356489.2-201ENST00000566968 3528 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDK3Q00526 RNU6-878P-201ENST00000384578 110 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDK3Q00526 ATP5F1P3-201ENST00000397213 657 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 PTMAP2-201ENST00000397627 327 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 HMGB1P17-201ENST00000403495 628 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 RAP1BP1-201ENST00000412709 553 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK3Q00526 VPS26BP1-201ENST00000417155 755 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 PTP4A1P5-201ENST00000420305 455 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AL953862.1-201ENST00000423016 168 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 AC087650.1-201ENST00000431445 468 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK3Q00526 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC005297.2-201ENST00000450430 606 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 RPL23AP35-201ENST00000451906 501 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK3Q00526 MTCO3P11-201ENST00000455103 774 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC087312.1-201ENST00000471411 480 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDK3Q00526 AP002812.1-201ENST00000495378 474 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC109458.1-201ENST00000508858 316 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 RAC1P2-201ENST00000511164 579 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK3Q00526 RNU6-150P-201ENST00000516237 95 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AC008802.1-201ENST00000519121 791 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC007991.1-201ENST00000522680 631 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK3Q00526 AC090877.1-201ENST00000561418 344 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK3Q00526 MIR5187-201ENST00000583479 76 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 MIR4999-201ENST00000585029 91 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 IGHV3-29-201ENST00000604817 344 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AL049634.3-201ENST00000604968 457 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AC006329.2-201ENST00000611491 394 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDK3Q00526 AC004943.3-201ENST00000624116 600 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AC079228.1-201ENST00000624774 1049 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AC012442.3-202ENST00000636742 206 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CDK3Q00526 AL161912.2-201ENST00000565707 3007 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AP000526.1-201ENST00000603308 1388 ntBASIC3.75□□□□□ -1.81
CDK3Q00526 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CDK3Q00526 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK3Q00526 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK3Q00526 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK3Q00526 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CDK3Q00526 RNU6-1200P-201ENST00000384162 107 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms