Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL596275.2-206ENST00000641957 626 ntBASIC4.14□□□□□ -1.75
RAE1P78406 ZNF734P-201ENST00000419494 1534 ntBASIC4.14□□□□□ -1.75
RAE1P78406 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RAE1P78406 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
RAE1P78406 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAE1P78406 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAE1P78406 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RAE1P78406 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAE1P78406 FARSBP1-201ENST00000435808 1778 ntBASIC4.13□□□□□ -1.75
RAE1P78406 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAE1P78406 MIR331-201ENST00000362302 94 ntBASIC4.13□□□□□ -1.75
RAE1P78406 Y_RNA.46-201ENST00000362695 102 ntBASIC4.13□□□□□ -1.75
RAE1P78406 RN7SKP226-201ENST00000364912 300 ntBASIC4.13□□□□□ -1.75
RAE1P78406 MIR129-1-201ENST00000384972 72 ntBASIC4.13□□□□□ -1.75
RAE1P78406 RPS20P2-201ENST00000402520 389 ntBASIC4.13□□□□□ -1.75
RAE1P78406 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.13□□□□□ -1.75
RAE1P78406 OR51AB1P-201ENST00000429046 620 ntBASIC4.13□□□□□ -1.75
RAE1P78406 HLA-N-201ENST00000437516 135 ntBASIC4.13□□□□□ -1.75
RAE1P78406 RABEPKP1-201ENST00000440529 1026 ntBASIC4.13□□□□□ -1.75
RAE1P78406 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.13□□□□□ -1.75
RAE1P78406 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.13□□□□□ -1.75
RAE1P78406 IFNWP4-201ENST00000453148 294 ntBASIC4.13□□□□□ -1.75
RAE1P78406 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.13□□□□□ -1.75
RAE1P78406 AP001992.1-205ENST00000462248 379 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AC022795.1-201ENST00000473808 480 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AC109927.2-201ENST00000506416 303 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.13□□□□□ -1.75
RAE1P78406 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.13□□□□□ -1.75
RAE1P78406 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.13□□□□□ -1.75
RAE1P78406 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.13□□□□□ -1.75
RAE1P78406 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.13□□□□□ -1.75
RAE1P78406 RN7SKP244-201ENST00000516513 307 ntBASIC4.13□□□□□ -1.75
RAE1P78406 RNU6-506P-201ENST00000516553 94 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AC024224.1-201ENST00000538284 609 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.13□□□□□ -1.75
RAE1P78406 EEF1B2P4-201ENST00000551398 348 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AC087883.1-201ENST00000551882 391 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.13□□□□□ -1.75
RAE1P78406 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.13□□□□□ -1.75
RAE1P78406 AC090615.1-201ENST00000577519 154 ntBASIC4.13□□□□□ -1.75
RAE1P78406 MIR3682-201ENST00000581338 84 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.13□□□□□ -1.75
RAE1P78406 RPL12P25-202ENST00000598100 674 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AL161729.4-201ENST00000604650 476 ntBASIC4.13□□□□□ -1.75
RAE1P78406 AL021997.2-201ENST00000615674 271 ntBASIC4.13□□□□□ -1.75
RAE1P78406 U4.5-201ENST00000617137 123 ntBASIC4.13□□□□□ -1.75
RAE1P78406 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.13□□□□□ -1.75
RAE1P78406 MIR4496-201ENST00000635896 61 ntBASIC4.13□□□□□ -1.75
RAE1P78406 OR5AK4P-201ENST00000635912 903 ntBASIC4.13□□□□□ -1.75
RAE1P78406 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAE1P78406 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAE1P78406 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RAE1P78406 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.13□□□□□ -1.75
RAE1P78406 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAE1P78406 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAE1P78406 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.13□□□□□ -1.75
RAE1P78406 ZNF33CP-201ENST00000432492 2030 ntBASIC4.12□□□□□ -1.75
RAE1P78406 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.12□□□□□ -1.75
RAE1P78406 SCN1A-220ENST00000641603 12506 ntBASIC4.12□□□□□ -1.75
RAE1P78406 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAE1P78406 AC095050.2-201ENST00000510748 1458 ntBASIC4.12□□□□□ -1.75
RAE1P78406 EIF2AP4-201ENST00000424793 1781 ntBASIC4.12□□□□□ -1.75
RAE1P78406 PABPC1P7-201ENST00000413177 1513 ntBASIC4.12□□□□□ -1.75
RAE1P78406 LINC01109-201ENST00000603837 3081 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL359893.1-201ENST00000447628 1580 ntBASIC4.12□□□□□ -1.75
RAE1P78406 OR5P1P-201ENST00000299512 925 ntBASIC4.12□□□□□ -1.75
RAE1P78406 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAE1P78406 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RAE1P78406 RNU1-94P-201ENST00000362627 173 ntBASIC4.12□□□□□ -1.75
RAE1P78406 RNA5SP258-201ENST00000362750 119 ntBASIC4.12□□□□□ -1.75
RAE1P78406 Y_RNA.234-201ENST00000364409 97 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL356421.1-201ENST00000403255 413 ntBASIC4.12□□□□□ -1.75
RAE1P78406 RPS16P5-201ENST00000406501 404 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.12□□□□□ -1.75
RAE1P78406 RPS23P10-201ENST00000416185 486 ntBASIC4.12□□□□□ -1.75
RAE1P78406 CYCSP10-201ENST00000417973 294 ntBASIC4.12□□□□□ -1.75
RAE1P78406 EIF1P1-201ENST00000421436 341 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.12□□□□□ -1.75
RAE1P78406 AL356387.2-201ENST00000422272 243 ntBASIC4.12□□□□□ -1.75
RAE1P78406 EIF4EP1-201ENST00000422311 642 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.12□□□□□ -1.75
RAE1P78406 EZH2P1-201ENST00000431167 291 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.12□□□□□ -1.75
RAE1P78406 MTCYBP45-201ENST00000435243 565 ntBASIC4.12□□□□□ -1.75
RAE1P78406 SBDSP1-204ENST00000453858 737 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC099563.1-201ENST00000456086 418 ntBASIC4.12□□□□□ -1.75
RAE1P78406 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RAE1P78406 snoU13.8-201ENST00000458890 104 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC013356.1-201ENST00000489027 564 ntBASIC4.12□□□□□ -1.75
RAE1P78406 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.12□□□□□ -1.75
RAE1P78406 RN7SL812P-201ENST00000493791 279 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC104164.2-201ENST00000496953 495 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC108145.1-201ENST00000503770 153 ntBASIC4.12□□□□□ -1.75
RAE1P78406 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RAE1P78406 AC111000.3-201ENST00000508057 576 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.12□□□□□ -1.75
RAE1P78406 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.12□□□□□ -1.75
RAE1P78406 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.12□□□□□ -1.75
RAE1P78406 AC022483.1-201ENST00000514020 567 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms