Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK1P53667 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LIMK1P53667 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMK1P53667 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK1P53667 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIMK1P53667 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.9□□□□□ -1.78
LIMK1P53667 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
LIMK1P53667 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIMK1P53667 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LIMK1P53667 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMK1P53667 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIMK1P53667 RNU6-657P-201ENST00000383904 107 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC007066.1-201ENST00000392902 381 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 RPL31P1-201ENST00000398116 372 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC245052.5-201ENST00000416320 649 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 OFD1P18Y-201ENST00000420889 959 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK1P53667 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.9□□□□□ -1.79
LIMK1P53667 TPTE2P3-201ENST00000441562 1189 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 RPL23AP76-201ENST00000441860 458 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 VN1R10P-201ENST00000447106 875 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK1P53667 RPS11P1-201ENST00000451072 473 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 CYCSP35-201ENST00000451978 304 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AL136097.1-201ENST00000456945 913 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 snoU13.3-201ENST00000459441 104 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK1P53667 KLRA1P-201ENST00000503499 986 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMK1P53667 AC010460.2-201ENST00000509054 677 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK1P53667 RN7SKP18-201ENST00000516005 275 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 RNU6-311P-201ENST00000516224 102 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 RNU6-352P-201ENST00000516908 107 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 NDUFA5P2-201ENST00000519723 344 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 MTND2P32-201ENST00000521584 1038 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK1P53667 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK1P53667 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIMK1P53667 AC022146.1-201ENST00000595307 847 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AL355812.1-201ENST00000603215 216 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 DPRXP5-201ENST00000604662 539 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AL450336.1-201ENST00000605180 586 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC091946.2-201ENST00000606105 291 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC090116.1-201ENST00000615679 446 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AC231759.1-201ENST00000616455 597 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LIMK1P53667 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LIMK1P53667 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK1P53667 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
LIMK1P53667 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
LIMK1P53667 AC109315.1-201ENST00000584143 1347 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK1P53667 AC130650.2-201ENST00000618736 2403 ntBASIC3.9□□□□□ -1.79
LIMK1P53667 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
LIMK1P53667 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMK1P53667 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMK1P53667 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIMK1P53667 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIMK1P53667 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIMK1P53667 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIMK1P53667 RNU6-560P-201ENST00000364007 108 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 Y_RNA.465-201ENST00000384293 102 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LIMK1P53667 SNRPEP2-201ENST00000397592 279 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 ERHP2-201ENST00000402323 299 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AL590084.1-201ENST00000407885 387 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 RPL7P44-201ENST00000424827 742 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AL591419.1-201ENST00000427423 339 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 ARF4P2-201ENST00000430209 526 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC236972.1-201ENST00000433225 199 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.89□□□□□ -1.79
LIMK1P53667 SLC31A1P1-201ENST00000451221 567 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.89□□□□□ -1.79
LIMK1P53667 RN7SL601P-201ENST00000471221 293 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC017015.1-201ENST00000477387 286 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AL024509.2-201ENST00000493462 493 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.89□□□□□ -1.79
LIMK1P53667 AC104619.4-201ENST00000510773 249 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC008837.2-201ENST00000513076 418 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC110760.3-202ENST00000515177 371 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 RN7SKP57-201ENST00000517248 293 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 OR4A12P-201ENST00000530847 918 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.89□□□□□ -1.79
LIMK1P53667 AC005832.3-201ENST00000537929 631 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC024224.1-201ENST00000538284 609 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.89□□□□□ -1.79
LIMK1P53667 YPEL5P3-201ENST00000547227 352 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC025627.2-201ENST00000576220 160 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 MIR3124-201ENST00000582636 67 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.89□□□□□ -1.79
LIMK1P53667 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.89□□□□□ -1.79
LIMK1P53667 AC020914.4-201ENST00000597690 277 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.89□□□□□ -1.79
LIMK1P53667 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIMK1P53667 AP001521.1-201ENST00000609150 300 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AL354976.1-201ENST00000613843 387 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC069209.1-201ENST00000619282 651 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC013470.4-201ENST00000619978 986 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 AC073348.1-201ENST00000623002 331 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms