Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-931P-201ENST00000363850 107 ntBASIC3.71□□□□□ -1.82
PDX1P52945 RNU6-374P-201ENST00000364146 108 ntBASIC3.71□□□□□ -1.82
PDX1P52945 SNORA4.1-201ENST00000364263 144 ntBASIC3.71□□□□□ -1.82
PDX1P52945 SNORA70E-201ENST00000384492 135 ntBASIC3.71□□□□□ -1.82
PDX1P52945 MIR153-1-201ENST00000384914 90 ntBASIC3.71□□□□□ -1.82
PDX1P52945 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AL603766.1-201ENST00000407763 664 ntBASIC3.71□□□□□ -1.82
PDX1P52945 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 RPL31P2-201ENST00000413849 377 ntBASIC3.71□□□□□ -1.82
PDX1P52945 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.71□□□□□ -1.82
PDX1P52945 AL593851.1-201ENST00000426171 157 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AP000907.1-201ENST00000428428 510 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 UBE2D3P1-201ENST00000436669 444 ntBASIC3.71□□□□□ -1.82
PDX1P52945 YWHAZP7-201ENST00000436906 631 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.71□□□□□ -1.82
PDX1P52945 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.71□□□□□ -1.82
PDX1P52945 HMGB3P22-202ENST00000451823 572 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AL109741.2-201ENST00000455561 343 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.71□□□□□ -1.82
PDX1P52945 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.71□□□□□ -1.82
PDX1P52945 PABPC1P3-201ENST00000469174 459 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDX1P52945 AC108941.1-201ENST00000502853 530 ntBASIC3.71□□□□□ -1.82
PDX1P52945 DSTNP2-201ENST00000504533 515 ntBASIC3.71□□□□□ -1.82
PDX1P52945 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDX1P52945 TMEM248P1-201ENST00000510579 951 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AC104619.4-201ENST00000510773 249 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.71□□□□□ -1.82
PDX1P52945 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 RNU6-583P-201ENST00000516012 92 ntBASIC3.71□□□□□ -1.82
PDX1P52945 IGKV2D-36-201ENST00000518643 226 ntBASIC3.71□□□□□ -1.82
PDX1P52945 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.71□□□□□ -1.82
PDX1P52945 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.71□□□□□ -1.82
PDX1P52945 OR5AK1P-201ENST00000524837 922 ntBASIC3.71□□□□□ -1.82
PDX1P52945 DEFB109D-201ENST00000529497 240 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.71□□□□□ -1.82
PDX1P52945 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.71□□□□□ -1.82
PDX1P52945 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.71□□□□□ -1.82
PDX1P52945 MIR3922-201ENST00000585192 84 ntBASIC3.71□□□□□ -1.82
PDX1P52945 OR4G1P-201ENST00000588632 938 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AC244505.7-201ENST00000599675 272 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.71□□□□□ -1.82
PDX1P52945 AC007566.2-201ENST00000603642 413 ntBASIC3.71□□□□□ -1.82
PDX1P52945 AC124312.4-201ENST00000605533 310 ntBASIC3.71□□□□□ -1.82
PDX1P52945 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.71□□□□□ -1.82
PDX1P52945 AC243773.3-201ENST00000613270 256 ntBASIC3.71□□□□□ -1.82
PDX1P52945 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.71□□□□□ -1.82
PDX1P52945 AL607023.1-201ENST00000620045 248 ntBASIC3.71□□□□□ -1.82
PDX1P52945 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.71□□□□□ -1.82
PDX1P52945 AC004943.3-201ENST00000624116 600 ntBASIC3.71□□□□□ -1.82
PDX1P52945 MTND2P41-201ENST00000637599 773 ntBASIC3.71□□□□□ -1.82
PDX1P52945 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.71□□□□□ -1.82
PDX1P52945 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDX1P52945 ZNF33CP-201ENST00000432492 2030 ntBASIC3.71□□□□□ -1.82
PDX1P52945 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.71□□□□□ -1.82
PDX1P52945 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDX1P52945 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDX1P52945 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDX1P52945 AL391994.1-201ENST00000254724 282 ntBASIC3.7□□□□□ -1.82
PDX1P52945 RNU6-1279P-201ENST00000383917 103 ntBASIC3.7□□□□□ -1.82
PDX1P52945 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PDX1P52945 AL024474.1-201ENST00000404655 591 ntBASIC3.7□□□□□ -1.82
PDX1P52945 PIGPP2-201ENST00000411569 458 ntBASIC3.7□□□□□ -1.82
PDX1P52945 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.7□□□□□ -1.82
PDX1P52945 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.7□□□□□ -1.82
PDX1P52945 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
PDX1P52945 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.7□□□□□ -1.82
PDX1P52945 PSMA2P3-201ENST00000429685 675 ntBASIC3.7□□□□□ -1.82
PDX1P52945 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.7□□□□□ -1.82
PDX1P52945 AC087650.1-201ENST00000431445 468 ntBASIC3.7□□□□□ -1.82
PDX1P52945 RPS6P15-201ENST00000431996 751 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AL354941.1-201ENST00000438600 464 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.7□□□□□ -1.82
PDX1P52945 MTND5P2-201ENST00000442927 1142 ntBASIC3.7□□□□□ -1.82
PDX1P52945 MTCYBP3-201ENST00000445588 1137 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AL606662.1-201ENST00000445763 553 ntBASIC3.7□□□□□ -1.82
PDX1P52945 MTCYBP11-201ENST00000447254 1109 ntBASIC3.7□□□□□ -1.82
PDX1P52945 PRDX3P3-201ENST00000447765 522 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.7□□□□□ -1.82
PDX1P52945 NDUFS5P3-201ENST00000450668 321 ntBASIC3.7□□□□□ -1.82
PDX1P52945 RPL26P28-201ENST00000451325 435 ntBASIC3.7□□□□□ -1.82
PDX1P52945 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.7□□□□□ -1.82
PDX1P52945 RPL21P11-201ENST00000461458 483 ntBASIC3.7□□□□□ -1.82
PDX1P52945 PLGLA-201ENST00000465668 449 ntBASIC3.7□□□□□ -1.82
PDX1P52945 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.7□□□□□ -1.82
PDX1P52945 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.7□□□□□ -1.82
PDX1P52945 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.7□□□□□ -1.82
PDX1P52945 AC010486.2-201ENST00000505572 483 ntBASIC3.7□□□□□ -1.82
PDX1P52945 MTCO3P44-201ENST00000510977 541 ntBASIC3.7□□□□□ -1.82
PDX1P52945 MRPS33P3-201ENST00000513456 322 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AC006499.2-201ENST00000513470 337 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AC119751.5-201ENST00000514077 770 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms