Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC009464.1-201ENST00000615731 469 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.26□□□□□ -1.89
FDFT1P37268 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FDFT1P37268 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.26□□□□□ -1.89
FDFT1P37268 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FDFT1P37268 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FDFT1P37268 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FDFT1P37268 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FDFT1P37268 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
FDFT1P37268 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
FDFT1P37268 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FDFT1P37268 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FDFT1P37268 OR6K3-202ENST00000368146 996 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 RNU6-761P-201ENST00000384148 107 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 MIR490-201ENST00000384865 128 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 RAD23BP2-201ENST00000416003 1207 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.25□□□□□ -1.89
FDFT1P37268 SDCBPP3-201ENST00000419629 891 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.25□□□□□ -1.89
FDFT1P37268 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.25□□□□□ -1.89
FDFT1P37268 HSFY1P1-201ENST00000423928 1178 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 RPP40P1-201ENST00000426762 456 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.25□□□□□ -1.89
FDFT1P37268 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.25□□□□□ -1.89
FDFT1P37268 HMGB3P6-201ENST00000444896 598 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.25□□□□□ -1.89
FDFT1P37268 MOB1AP2-201ENST00000446060 614 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.25□□□□□ -1.89
FDFT1P37268 RPL21P10-201ENST00000463521 490 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 FTH1P2-201ENST00000466086 412 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.25□□□□□ -1.89
FDFT1P37268 MTCO2P9-201ENST00000503214 694 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FDFT1P37268 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.25□□□□□ -1.89
FDFT1P37268 PRELID3BP4-201ENST00000515476 571 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.25□□□□□ -1.89
FDFT1P37268 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.25□□□□□ -1.89
FDFT1P37268 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.25□□□□□ -1.89
FDFT1P37268 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.25□□□□□ -1.89
FDFT1P37268 AC011611.1-201ENST00000552179 197 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.25□□□□□ -1.89
FDFT1P37268 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.25□□□□□ -1.89
FDFT1P37268 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.25□□□□□ -1.89
FDFT1P37268 AC092474.3-201ENST00000603022 568 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.25□□□□□ -1.89
FDFT1P37268 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FDFT1P37268 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.25□□□□□ -1.89
FDFT1P37268 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 AC034229.5-201ENST00000624258 185 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
FDFT1P37268 MTCO1P4-201ENST00000520516 1409 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 AC021755.1-201ENST00000559747 1447 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.25□□□□□ -1.89
FDFT1P37268 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FDFT1P37268 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FDFT1P37268 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FDFT1P37268 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FDFT1P37268 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
FDFT1P37268 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FDFT1P37268 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
FDFT1P37268 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.24□□□□□ -1.89
FDFT1P37268 RNU6-921P-201ENST00000384361 107 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 MIR649-201ENST00000384843 97 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 MIR134-201ENST00000385258 73 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 RNU4-65P-201ENST00000410473 140 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 MTCO3P12-201ENST00000416718 547 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 MTCO2P1-201ENST00000424648 477 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 DEFB130D-201ENST00000426866 237 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 UBE2D3P3-201ENST00000426992 425 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 OR2AS1P-201ENST00000427827 319 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.24□□□□□ -1.89
FDFT1P37268 AC008379.1-201ENST00000463655 464 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 AC020898.1-201ENST00000474167 787 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.24□□□□□ -1.89
FDFT1P37268 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.24□□□□□ -1.89
FDFT1P37268 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.24□□□□□ -1.89
FDFT1P37268 AC110794.1-201ENST00000505816 425 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.24□□□□□ -1.89
FDFT1P37268 RNU6-334P-201ENST00000517072 102 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 RPL21P12-201ENST00000559810 515 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.24□□□□□ -1.89
FDFT1P37268 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.24□□□□□ -1.89
FDFT1P37268 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.24□□□□□ -1.89
FDFT1P37268 CKS1BP3-201ENST00000600888 237 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 AL365400.2-201ENST00000605604 902 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.24□□□□□ -1.89
FDFT1P37268 AL590396.4-201ENST00000636779 956 ntBASIC3.24□□□□□ -1.89
FDFT1P37268 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FDFT1P37268 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FDFT1P37268 AC118273.1-201ENST00000525324 3006 ntBASIC3.23□□□□□ -1.89
FDFT1P37268 AC117529.2-201ENST00000512159 2068 ntBASIC3.23□□□□□ -1.89
FDFT1P37268 AC093831.2-201ENST00000624393 3427 ntBASIC3.23□□□□□ -1.89
FDFT1P37268 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
FDFT1P37268 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FDFT1P37268 OR1S2-201ENST00000302592 978 ntBASIC3.23□□□□□ -1.89
FDFT1P37268 Y_RNA.110-201ENST00000363220 99 ntBASIC3.23□□□□□ -1.89
FDFT1P37268 SNORA62.3-201ENST00000365110 153 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms