Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 MTCO3P2-201ENST00000457365 171 ntBASIC4.64□□□□□ -1.67
MSX2P35548 RPS27AP17-201ENST00000463344 455 ntBASIC4.64□□□□□ -1.67
MSX2P35548 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
MSX2P35548 AC090453.1-201ENST00000495560 436 ntBASIC4.64□□□□□ -1.67
MSX2P35548 NIPA2P2-201ENST00000496376 1083 ntBASIC4.64□□□□□ -1.67
MSX2P35548 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.64□□□□□ -1.67
MSX2P35548 AC021146.3-201ENST00000511911 260 ntBASIC4.64□□□□□ -1.67
MSX2P35548 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.64□□□□□ -1.67
MSX2P35548 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.64□□□□□ -1.67
MSX2P35548 SNORA40.12-201ENST00000516329 111 ntBASIC4.64□□□□□ -1.67
MSX2P35548 RN7SKP96-201ENST00000516948 297 ntBASIC4.64□□□□□ -1.67
MSX2P35548 CYCSP28-201ENST00000534284 321 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.64□□□□□ -1.67
MSX2P35548 AC243972.3-201ENST00000539655 198 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC123904.2-201ENST00000548059 300 ntBASIC4.64□□□□□ -1.67
MSX2P35548 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.64□□□□□ -1.67
MSX2P35548 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.64□□□□□ -1.67
MSX2P35548 AC079075.1-201ENST00000559543 878 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC099489.2-201ENST00000574976 260 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.64□□□□□ -1.67
MSX2P35548 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.64□□□□□ -1.67
MSX2P35548 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.64□□□□□ -1.67
MSX2P35548 YWHAQP7-201ENST00000603536 658 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.64□□□□□ -1.67
MSX2P35548 AL049794.2-201ENST00000616301 365 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.64□□□□□ -1.67
MSX2P35548 MIR8080-201ENST00000622224 89 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC005858.4-201ENST00000623191 700 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC010149.2-201ENST00000637608 315 ntBASIC4.64□□□□□ -1.67
MSX2P35548 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AL049780.3-201ENST00000624612 1583 ntBASIC4.64□□□□□ -1.67
MSX2P35548 AC139713.2-215ENST00000641428 5037 ntBASIC4.64□□□□□ -1.67
MSX2P35548 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
MSX2P35548 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
MSX2P35548 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.64□□□□□ -1.67
MSX2P35548 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MSX2P35548 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
MSX2P35548 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
MSX2P35548 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 RN7SKP124-201ENST00000364730 341 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RNU6-744P-201ENST00000365557 107 ntBASIC4.63□□□□□ -1.67
MSX2P35548 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
MSX2P35548 RNU6-1316P-201ENST00000384242 108 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RNU6-1158P-201ENST00000391167 107 ntBASIC4.63□□□□□ -1.67
MSX2P35548 U3.25-201ENST00000391209 220 ntBASIC4.63□□□□□ -1.67
MSX2P35548 ARF4P3-201ENST00000397387 509 ntBASIC4.63□□□□□ -1.67
MSX2P35548 MRPL42P2-201ENST00000403169 426 ntBASIC4.63□□□□□ -1.67
MSX2P35548 U3.35-201ENST00000408405 208 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RNU6-1068P-201ENST00000410958 103 ntBASIC4.63□□□□□ -1.67
MSX2P35548 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AL121776.1-201ENST00000429337 372 ntBASIC4.63□□□□□ -1.67
MSX2P35548 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 AP000281.1-201ENST00000444036 316 ntBASIC4.63□□□□□ -1.67
MSX2P35548 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.63□□□□□ -1.67
MSX2P35548 IGHV5-78-201ENST00000450948 295 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.63□□□□□ -1.67
MSX2P35548 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.63□□□□□ -1.67
MSX2P35548 AC233279.1-201ENST00000455300 423 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RNU6-261P-201ENST00000459506 102 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RPL7P15-201ENST00000461190 712 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RN7SL517P-201ENST00000462240 305 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AC063943.1-201ENST00000465434 453 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RN7SL547P-201ENST00000490793 290 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RNU6-277P-201ENST00000516272 106 ntBASIC4.63□□□□□ -1.67
MSX2P35548 SOD1P3-201ENST00000518682 454 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.63□□□□□ -1.67
MSX2P35548 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.63□□□□□ -1.67
MSX2P35548 AC011611.1-201ENST00000552179 197 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AC090515.3-201ENST00000560431 315 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AC007225.2-201ENST00000562529 256 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AC009117.1-201ENST00000563948 554 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AL355375.2-201ENST00000574825 175 ntBASIC4.63□□□□□ -1.67
MSX2P35548 MIR4489-201ENST00000578869 62 ntBASIC4.63□□□□□ -1.67
MSX2P35548 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.63□□□□□ -1.67
MSX2P35548 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.63□□□□□ -1.67
MSX2P35548 AL365204.3-201ENST00000612448 685 ntBASIC4.63□□□□□ -1.67
MSX2P35548 DISC2.1-201ENST00000612827 205 ntBASIC4.63□□□□□ -1.67
MSX2P35548 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 AC009161.2-201ENST00000624626 138 ntBASIC4.63□□□□□ -1.67
MSX2P35548 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.63□□□□□ -1.67
MSX2P35548 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
MSX2P35548 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 AL359922.3-201ENST00000624779 1670 ntBASIC4.63□□□□□ -1.67
MSX2P35548 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.63□□□□□ -1.67
MSX2P35548 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSX2P35548 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.63□□□□□ -1.67
MSX2P35548 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MSX2P35548 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms