Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 RPL21P41-201ENST00000459863 264 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 ATG10-AS1-201ENST00000504846 648 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL5A1P20908 RNA5SP458-201ENST00000516188 119 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 SNORA70.14-201ENST00000516205 110 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 VTA1P2-201ENST00000520205 911 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 AP001646.1-201ENST00000527936 915 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL5A1P20908 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL5A1P20908 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 AC126365.2-201ENST00000580630 379 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AC017076.1-201ENST00000607613 578 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 OR10AB1P-202ENST00000641219 1686 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
COL5A1P20908 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL5A1P20908 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL5A1P20908 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL5A1P20908 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.6□□□□□ -1.99
COL5A1P20908 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.6□□□□□ -1.99
COL5A1P20908 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL5A1P20908 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
COL5A1P20908 RNU6-891P-201ENST00000384280 111 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 MIR7-1-201ENST00000384871 110 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 PTP4A1P5-201ENST00000420305 455 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 CR848007.2-201ENST00000424918 787 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 MTND5P8-201ENST00000449817 1083 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.6□□□□□ -1.99
COL5A1P20908 AC078817.1-201ENST00000492623 435 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.6□□□□□ -1.99
COL5A1P20908 KCTD9P5-201ENST00000504141 1170 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 AC006445.2-201ENST00000510061 472 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.6□□□□□ -1.99
COL5A1P20908 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL5A1P20908 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
COL5A1P20908 AC044913.1-201ENST00000557200 430 ntBASIC2.6□□□□□ -1.99
COL5A1P20908 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.6□□□□□ -1.99
COL5A1P20908 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.6□□□□□ -1.99
COL5A1P20908 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
COL5A1P20908 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL5A1P20908 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
COL5A1P20908 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COL5A1P20908 AP000568.1-201ENST00000282964 442 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 RNA5SP99-201ENST00000364020 114 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL5A1P20908 AL512504.1-201ENST00000415494 778 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 MTND2P9-201ENST00000422293 931 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.59□□□□□ -1.99
COL5A1P20908 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.59□□□□□ -1.99
COL5A1P20908 AL662791.1-201ENST00000441992 928 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.59□□□□□ -1.99
COL5A1P20908 SNRPGP5-201ENST00000456003 220 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 TRBV8-1-201ENST00000481590 279 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 AC011037.1-201ENST00000483964 558 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.59□□□□□ -1.99
COL5A1P20908 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.59□□□□□ -1.99
COL5A1P20908 OR5AK3P-201ENST00000527486 1297 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.59□□□□□ -1.99
COL5A1P20908 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.59□□□□□ -1.99
COL5A1P20908 OR11H5P-201ENST00000554039 926 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.59□□□□□ -1.99
COL5A1P20908 FAM60CP-201ENST00000591086 664 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 OR4H6P-202ENST00000603819 340 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 AC010680.4-201ENST00000605334 543 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 AC092184.1-201ENST00000625042 715 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 FRG1DP-201ENST00000635586 771 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL5A1P20908 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.59□□□□□ -1.99
COL5A1P20908 RLIMP2-201ENST00000427891 1563 ntBASIC2.59□□□□□ -1.99
COL5A1P20908 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.59□□□□□ -1.99
COL5A1P20908 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -2
COL5A1P20908 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
COL5A1P20908 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
COL5A1P20908 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.58□□□□□ -2
COL5A1P20908 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.58□□□□□ -2
COL5A1P20908 FCF1P6-201ENST00000456841 595 ntBASIC2.58□□□□□ -2
COL5A1P20908 RPL23AP62-201ENST00000463396 453 ntBASIC2.58□□□□□ -2
COL5A1P20908 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.58□□□□□ -2
COL5A1P20908 AC108157.1-201ENST00000510511 539 ntBASIC2.58□□□□□ -2
COL5A1P20908 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.58□□□□□ -2
COL5A1P20908 RNA5SP320-201ENST00000516263 124 ntBASIC2.58□□□□□ -2
COL5A1P20908 RPL7P20-201ENST00000520308 745 ntBASIC2.58□□□□□ -2
COL5A1P20908 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.58□□□□□ -2
COL5A1P20908 AL355836.1-201ENST00000555951 870 ntBASIC2.58□□□□□ -2
COL5A1P20908 AC015712.3-201ENST00000559380 164 ntBASIC2.58□□□□□ -2
COL5A1P20908 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.58□□□□□ -2
COL5A1P20908 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.58□□□□□ -2
COL5A1P20908 AL158211.2-201ENST00000607282 395 ntBASIC2.58□□□□□ -2
COL5A1P20908 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.58□□□□□ -2
COL5A1P20908 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COL5A1P20908 AL356274.1-201ENST00000617064 410 ntBASIC2.58□□□□□ -2
COL5A1P20908 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.58□□□□□ -2
COL5A1P20908 AC025034.2-201ENST00000623264 286 ntBASIC2.58□□□□□ -2
COL5A1P20908 AL590396.2-201ENST00000636511 1041 ntBASIC2.58□□□□□ -2
COL5A1P20908 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.58□□□□□ -2
COL5A1P20908 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms