Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
LMNB1P20700 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.87□□□□□ -1.47
LMNB1P20700 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LMNB1P20700 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.86□□□□□ -1.47
LMNB1P20700 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 AC009313.2-201ENST00000417893 1941 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 RNU6-451P-201ENST00000362921 107 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 RNY3P3-201ENST00000363816 102 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 RNU6-853P-201ENST00000364306 107 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 RNA5SP241-201ENST00000391326 114 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 RPS26P8-201ENST00000393490 348 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 SDCBPP3-201ENST00000419629 891 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.86□□□□□ -1.47
LMNB1P20700 AC019097.1-201ENST00000424783 735 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 AL035410.1-201ENST00000427409 427 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 NPM1P24-201ENST00000428039 894 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 RPL34P6-201ENST00000432390 345 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.86□□□□□ -1.47
LMNB1P20700 RN7SL809P-201ENST00000482040 297 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 AP001025.2-201ENST00000490908 477 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 AC023194.1-201ENST00000493084 308 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 RPS4XP18-201ENST00000495480 763 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 Vault.3-201ENST00000516676 95 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 RNU6-1220P-201ENST00000517126 108 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.86□□□□□ -1.47
LMNB1P20700 AC053481.3-201ENST00000577881 843 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.86□□□□□ -1.47
LMNB1P20700 BNIP3P10-201ENST00000605360 577 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 AC135507.2-201ENST00000612443 309 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.86□□□□□ -1.47
LMNB1P20700 AP005019.3-201ENST00000620418 560 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 RNA5SP196-201ENST00000625967 102 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.86□□□□□ -1.47
LMNB1P20700 AC010149.2-201ENST00000637608 315 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 AC025031.4-201ENST00000621248 3271 ntBASIC5.86□□□□□ -1.47
LMNB1P20700 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
LMNB1P20700 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LMNB1P20700 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.86□□□□□ -1.47
LMNB1P20700 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LMNB1P20700 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.85□□□□□ -1.47
LMNB1P20700 PCAT14-202ENST00000627127 3935 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC108467.2-201ENST00000617640 1597 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 NMD3P1-201ENST00000439704 1488 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.85□□□□□ -1.47
LMNB1P20700 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.85□□□□□ -1.47
LMNB1P20700 RNU6-116P-201ENST00000384042 109 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 SNORA48.4-201ENST00000391089 134 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AL023807.1-201ENST00000407932 359 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 SNORA11F-201ENST00000408237 128 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.85□□□□□ -1.47
LMNB1P20700 AL356387.2-201ENST00000422272 243 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC008850.1-201ENST00000427546 362 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 OR51AB1P-201ENST00000429046 620 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 RPL7AP49-201ENST00000429522 581 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AL591438.1-201ENST00000433508 581 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.85□□□□□ -1.47
LMNB1P20700 AL450023.3-201ENST00000440592 271 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AC093019.1-201ENST00000443135 252 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AC243772.1-201ENST00000451620 410 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 RAD23BP3-201ENST00000454157 1152 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AP000893.1-201ENST00000474462 794 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 RPL36AP51-201ENST00000487216 318 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.85□□□□□ -1.47
LMNB1P20700 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC091868.1-201ENST00000508746 304 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.85□□□□□ -1.47
LMNB1P20700 RNU1-6P-201ENST00000516290 144 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms