Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RN7SKP128-201ENST00000364270 303 ntBASIC4.9□□□□□ -1.63
ATF4P18848 MIR621-201ENST00000384919 96 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AL122016.1-201ENST00000403365 367 ntBASIC4.9□□□□□ -1.63
ATF4P18848 LAP3P1-201ENST00000403648 294 ntBASIC4.9□□□□□ -1.63
ATF4P18848 MIR1290-201ENST00000408735 78 ntBASIC4.9□□□□□ -1.63
ATF4P18848 RN7SKP114-201ENST00000410327 279 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AC080125.1-201ENST00000414888 684 ntBASIC4.9□□□□□ -1.63
ATF4P18848 TOMM22P1-201ENST00000418578 312 ntBASIC4.9□□□□□ -1.63
ATF4P18848 EI24P4-201ENST00000423683 1078 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.9□□□□□ -1.63
ATF4P18848 AL591212.2-201ENST00000433923 257 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.9□□□□□ -1.63
ATF4P18848 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.9□□□□□ -1.63
ATF4P18848 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.9□□□□□ -1.63
ATF4P18848 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.9□□□□□ -1.63
ATF4P18848 PPP1R2P5-201ENST00000457256 603 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AL133445.1-201ENST00000467051 452 ntBASIC4.9□□□□□ -1.63
ATF4P18848 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.9□□□□□ -1.63
ATF4P18848 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.9□□□□□ -1.63
ATF4P18848 RPL37P23-201ENST00000492641 294 ntBASIC4.9□□□□□ -1.63
ATF4P18848 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.9□□□□□ -1.63
ATF4P18848 FAM206BP-201ENST00000510179 541 ntBASIC4.9□□□□□ -1.63
ATF4P18848 TOMM22P4-201ENST00000511318 336 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.9□□□□□ -1.63
ATF4P18848 TTC39CP1-201ENST00000512513 755 ntBASIC4.9□□□□□ -1.63
ATF4P18848 SNORA31.3-201ENST00000516029 96 ntBASIC4.9□□□□□ -1.63
ATF4P18848 SCARNA5-201ENST00000516201 276 ntBASIC4.9□□□□□ -1.63
ATF4P18848 RNU6-1038P-201ENST00000516516 104 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.9□□□□□ -1.63
ATF4P18848 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.9□□□□□ -1.63
ATF4P18848 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ATF4P18848 RN7SL230P-201ENST00000580835 303 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AL390877.1-201ENST00000605704 214 ntBASIC4.9□□□□□ -1.63
ATF4P18848 SNORD96A-201ENST00000606577 79 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AL355810.1-201ENST00000614629 552 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.9□□□□□ -1.63
ATF4P18848 AL591926.1-201ENST00000620542 217 ntBASIC4.9□□□□□ -1.63
ATF4P18848 AC073488.9-201ENST00000631601 754 ntBASIC4.9□□□□□ -1.63
ATF4P18848 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATF4P18848 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATF4P18848 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.9□□□□□ -1.63
ATF4P18848 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATF4P18848 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ATF4P18848 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
ATF4P18848 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.9□□□□□ -1.63
ATF4P18848 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ATF4P18848 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATF4P18848 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
ATF4P18848 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATF4P18848 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATF4P18848 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATF4P18848 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ATF4P18848 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
ATF4P18848 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
ATF4P18848 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATF4P18848 RNU6-522P-201ENST00000364497 107 ntBASIC4.89□□□□□ -1.63
ATF4P18848 Y_RNA.378-201ENST00000365652 113 ntBASIC4.89□□□□□ -1.63
ATF4P18848 RNU6-14P-201ENST00000384630 106 ntBASIC4.89□□□□□ -1.63
ATF4P18848 CISD1P1-201ENST00000393907 327 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AL121834.1-202ENST00000404494 277 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.89□□□□□ -1.63
ATF4P18848 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.89□□□□□ -1.63
ATF4P18848 AL451054.2-201ENST00000420896 202 ntBASIC4.89□□□□□ -1.63
ATF4P18848 HSPE1P1-201ENST00000421494 318 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.89□□□□□ -1.63
ATF4P18848 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.89□□□□□ -1.63
ATF4P18848 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.89□□□□□ -1.63
ATF4P18848 AL591704.1-201ENST00000432574 275 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AL645939.3-201ENST00000435408 225 ntBASIC4.89□□□□□ -1.63
ATF4P18848 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.89□□□□□ -1.63
ATF4P18848 MRPL50P4-201ENST00000446432 475 ntBASIC4.89□□□□□ -1.63
ATF4P18848 PRDX3P3-201ENST00000447765 522 ntBASIC4.89□□□□□ -1.63
ATF4P18848 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.89□□□□□ -1.63
ATF4P18848 VPS25P1-201ENST00000455691 508 ntBASIC4.89□□□□□ -1.63
ATF4P18848 RNU6-329P-201ENST00000459618 107 ntBASIC4.89□□□□□ -1.63
ATF4P18848 S100A11P1-201ENST00000477525 312 ntBASIC4.89□□□□□ -1.63
ATF4P18848 RN7SL70P-201ENST00000478322 302 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AL049874.1-201ENST00000489560 388 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AC103851.1-201ENST00000506833 274 ntBASIC4.89□□□□□ -1.63
ATF4P18848 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.89□□□□□ -1.63
ATF4P18848 RNU6-1073P-201ENST00000517182 106 ntBASIC4.89□□□□□ -1.63
ATF4P18848 HMGB1P19-201ENST00000517578 577 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.89□□□□□ -1.63
ATF4P18848 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.89□□□□□ -1.63
ATF4P18848 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.89□□□□□ -1.63
ATF4P18848 FKBP1BP1-201ENST00000553366 325 ntBASIC4.89□□□□□ -1.63
ATF4P18848 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.89□□□□□ -1.63
ATF4P18848 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.89□□□□□ -1.63
ATF4P18848 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.89□□□□□ -1.63
ATF4P18848 AC022968.1-201ENST00000567372 442 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.89□□□□□ -1.63
ATF4P18848 AC127024.5-201ENST00000580085 462 ntBASIC4.89□□□□□ -1.63
ATF4P18848 MIR4742-201ENST00000581069 85 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ATF4P18848 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.89□□□□□ -1.63
ATF4P18848 MIR212-201ENST00000586026 110 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AC002545.1-201ENST00000592511 181 ntBASIC4.89□□□□□ -1.63
ATF4P18848 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.89□□□□□ -1.63
ATF4P18848 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.89□□□□□ -1.63
ATF4P18848 AL592436.1-201ENST00000605135 558 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms