Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOBP13765 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOBP13765 OR52B1P-201ENST00000316506 909 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 Y_RNA.97-201ENST00000363094 102 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 RNA5SP513-201ENST00000364648 118 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOBP13765 SNORA75-201ENST00000384158 137 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 RNU11-4P-201ENST00000391149 133 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 DEFB108C-201ENST00000400154 252 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 BTBD10P2-201ENST00000404779 676 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 MIR1305-201ENST00000408300 86 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC004552.1-201ENST00000419089 348 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 RPL21P32-201ENST00000419877 477 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 COX6CP17-201ENST00000421389 185 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 ELOCP18-201ENST00000434209 337 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOBP13765 MTND5P14-201ENST00000441481 1267 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 HMGB3P21-201ENST00000452483 547 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 RPL36AP13-201ENST00000457490 317 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 RPS26P3-201ENST00000470205 348 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 RPL31P50-201ENST00000471002 296 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC090543.2-201ENST00000483963 348 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC004057.1-201ENST00000485827 348 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 RPS27AP13-201ENST00000498403 237 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 ARL2BPP4-201ENST00000506854 471 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC022447.3-201ENST00000506865 495 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC016065.2-201ENST00000514530 444 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC025881.1-201ENST00000518851 512 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 COX6CP8-201ENST00000522620 226 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AP003730.1-201ENST00000524605 285 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC092470.1-201ENST00000546187 132 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC012417.1-201ENST00000582307 1039 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 MIR3939-201ENST00000582614 106 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC097468.3-201ENST00000607956 456 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC103710.4-201ENST00000609301 899 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC015540.1-201ENST00000615828 501 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC009704.2-201ENST00000618739 483 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC009318.4-201ENST00000620496 486 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 MIR6758-201ENST00000620653 63 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AP005264.7-201ENST00000625003 745 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AL022578.1-201ENST00000439330 1433 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 AC093535.2-201ENST00000624769 2326 ntBASIC3.66□□□□□ -1.82
HLA-DOBP13765 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOBP13765 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DOBP13765 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOBP13765 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DOBP13765 MTND4P26-201ENST00000415971 1359 ntBASIC3.65□□□□□ -1.82
HLA-DOBP13765 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DOBP13765 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
HLA-DOBP13765 DDX18P3-201ENST00000404856 2007 ntBASIC3.65□□□□□ -1.82
HLA-DOBP13765 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DOBP13765 SNORD35B-201ENST00000363660 87 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 RNU6-777P-201ENST00000364265 104 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 RHOT1P2-201ENST00000366423 333 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 MIR93-201ENST00000385024 80 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 RNU6-952P-201ENST00000391164 108 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AL031679.1-201ENST00000400616 525 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 MTCYBP36-201ENST00000404146 440 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 RN7SKP56-201ENST00000410513 331 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 USP9YP28-201ENST00000435142 589 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 LSM1P1-201ENST00000438629 273 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 RPS4XP4-201ENST00000443195 763 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC239367.2-201ENST00000447309 705 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC009220.1-201ENST00000451614 275 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 RN7SL604P-201ENST00000492589 296 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms