Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.05□□□□□ -1.6
SNRPA1P09661 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.05□□□□□ -1.6
SNRPA1P09661 AC005229.2-201ENST00000456995 399 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 RPL7P15-201ENST00000461190 712 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.05□□□□□ -1.6
SNRPA1P09661 RN7SL585P-201ENST00000470538 280 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 RPL37P25-201ENST00000507308 276 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.05□□□□□ -1.6
SNRPA1P09661 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.05□□□□□ -1.6
SNRPA1P09661 AC239860.2-201ENST00000525886 270 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.05□□□□□ -1.6
SNRPA1P09661 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
SNRPA1P09661 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.05□□□□□ -1.6
SNRPA1P09661 PCMTD1P2-201ENST00000565017 355 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AC087499.8-201ENST00000578406 226 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.05□□□□□ -1.6
SNRPA1P09661 AL356596.1-201ENST00000624230 379 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.05□□□□□ -1.6
SNRPA1P09661 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.05□□□□□ -1.6
SNRPA1P09661 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
SNRPA1P09661 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SNRPA1P09661 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNRPA1P09661 AC106871.1-201ENST00000568324 3102 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 ASNSP1-201ENST00000518311 1939 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.04□□□□□ -1.6
SNRPA1P09661 AL450338.1-201ENST00000407987 512 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 SNORA3C-201ENST00000408792 125 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.04□□□□□ -1.6
SNRPA1P09661 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.04□□□□□ -1.6
SNRPA1P09661 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.04□□□□□ -1.6
SNRPA1P09661 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.04□□□□□ -1.6
SNRPA1P09661 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.04□□□□□ -1.6
SNRPA1P09661 RPL21P11-201ENST00000461458 483 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 OR4G11P-201ENST00000492842 939 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AC021146.3-201ENST00000511911 260 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.04□□□□□ -1.6
SNRPA1P09661 SCARNA14-201ENST00000516903 136 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.04□□□□□ -1.6
SNRPA1P09661 MTCYBP41-201ENST00000528913 1123 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AC087276.1-201ENST00000529659 480 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.04□□□□□ -1.6
SNRPA1P09661 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
SNRPA1P09661 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.04□□□□□ -1.6
SNRPA1P09661 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.04□□□□□ -1.6
SNRPA1P09661 AC115085.1-201ENST00000588924 229 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.04□□□□□ -1.6
SNRPA1P09661 AC008739.3-201ENST00000603262 127 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AL596327.1-201ENST00000603629 213 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 SNORA51-201ENST00000606420 132 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AC126118.1-201ENST00000607744 628 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AC005344.1-201ENST00000613391 459 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AC138932.5-201ENST00000617759 563 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 AL139089.1-201ENST00000620372 975 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.04□□□□□ -1.6
SNRPA1P09661 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SNRPA1P09661 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNRPA1P09661 MTND4P16-201ENST00000466108 1367 ntBASIC5.04□□□□□ -1.6
SNRPA1P09661 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
SNRPA1P09661 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.03□□□□□ -1.6
SNRPA1P09661 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
SNRPA1P09661 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SNRPA1P09661 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 AP004289.2-201ENST00000444413 1457 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SNRPA1P09661 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 RNU6-115P-201ENST00000364310 107 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 RNU6-348P-201ENST00000384386 107 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 RNU6-1122P-201ENST00000384449 107 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 MTCYBP36-201ENST00000404146 440 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 RNA5SP44-201ENST00000410446 133 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 RNU6-603P-201ENST00000411403 107 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 RPL7AP73-201ENST00000413490 353 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 FNDC3CP-201ENST00000420795 1155 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.03□□□□□ -1.6
SNRPA1P09661 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 SLC31A1P1-201ENST00000451221 567 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.03□□□□□ -1.6
SNRPA1P09661 UBA52P3-201ENST00000491303 382 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.03□□□□□ -1.6
SNRPA1P09661 AC116347.2-201ENST00000514912 523 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.03□□□□□ -1.6
SNRPA1P09661 AC027309.2-201ENST00000520566 192 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms