Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFAP04085 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 AC012254.3-201ENST00000591183 2117 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
PDGFAP04085 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 KPNA2P1-201ENST00000458289 1591 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFAP04085 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
PDGFAP04085 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDGFAP04085 RN7SKP162-201ENST00000363605 345 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 Y_RNA.158-201ENST00000363651 101 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 Y_RNA.399-201ENST00000383955 105 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDGFAP04085 SNORD70.1-201ENST00000391007 85 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 HMGB1P20-201ENST00000402555 677 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 Y_RNA.646-201ENST00000410980 101 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 DPPA2P3-201ENST00000411853 655 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFAP04085 RPL12P46-201ENST00000436610 195 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFAP04085 AC058823.1-201ENST00000485315 474 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 AP002812.1-201ENST00000495378 474 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFAP04085 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.53□□□□□ -1.52
PDGFAP04085 RNU6-123P-201ENST00000516163 102 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFAP04085 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFAP04085 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFAP04085 AC141002.1-201ENST00000607025 279 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 ATP5A1P2-202ENST00000616464 443 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 PISRT1.1-201ENST00000616930 107 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 MIR6130-201ENST00000619419 109 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 AL137067.2-201ENST00000621202 131 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 AC022418.1-201ENST00000624118 445 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFAP04085 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFAP04085 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFAP04085 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDGFAP04085 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFAP04085 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFAP04085 OR9K1P-202ENST00000641111 3217 ntBASIC5.53□□□□□ -1.52
PDGFAP04085 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFAP04085 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFAP04085 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFAP04085 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PDGFAP04085 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFAP04085 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFAP04085 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFAP04085 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 AL359955.1-201ENST00000455242 3275 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDGFAP04085 RNU6-1115P-201ENST00000362490 106 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 SNORD3E-201ENST00000362899 217 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 RNU6-128P-201ENST00000383976 107 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 SNORA75B-201ENST00000384053 137 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 MIR433-201ENST00000384837 93 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 MIR105-2-201ENST00000385083 81 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDGFAP04085 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PDGFAP04085 RNU6-985P-201ENST00000410182 104 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 RNU4-25P-201ENST00000410569 230 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AC092447.6-201ENST00000414578 210 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 UBE2V1P14-201ENST00000415815 558 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 RPLP0P7-201ENST00000416050 667 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 NPM1P18-201ENST00000434232 732 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AC108059.2-201ENST00000434626 151 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 RPL7P28-201ENST00000437739 740 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFAP04085 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFAP04085 IGHV5-78-201ENST00000450948 295 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 RN7SL57P-201ENST00000493687 290 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AC097473.1-201ENST00000508142 408 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFAP04085 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFAP04085 RNU6-1137P-201ENST00000517073 99 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 RANP9-201ENST00000519957 271 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 PTP4A1P6-201ENST00000531034 478 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFAP04085 MIR4680-201ENST00000580906 66 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms