Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL357559.1-201ENST00000622228 274 ntBASIC6.46□□□□□ -1.38
ALDH1A1P00352 AC091953.5-201ENST00000622919 233 ntBASIC6.46□□□□□ -1.38
ALDH1A1P00352 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ALDH1A1P00352 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ALDH1A1P00352 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
ALDH1A1P00352 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ALDH1A1P00352 MFSD8-219ENST00000641228 2559 ntBASIC6.46□□□□□ -1.38
ALDH1A1P00352 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
ALDH1A1P00352 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ALDH1A1P00352 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.46□□□□□ -1.38
ALDH1A1P00352 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ALDH1A1P00352 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ALDH1A1P00352 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ALDH1A1P00352 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ALDH1A1P00352 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 RNU6-545P-201ENST00000362681 104 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 SNORA17.1-201ENST00000362945 126 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 Y_RNA.274-201ENST00000364714 101 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 RNU6-806P-201ENST00000365147 105 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 Y_RNA.416-201ENST00000384014 113 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC091390.1-201ENST00000433904 331 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 HMGB3P21-201ENST00000452483 547 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 HMGN3P1-201ENST00000453847 193 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 AL445687.2-201ENST00000458156 728 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC105384.2-201ENST00000508433 640 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 RN7SKP288-201ENST00000516227 268 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 IGKV2-36-201ENST00000519999 223 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC063949.1-201ENST00000552900 865 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC011447.4-201ENST00000587562 111 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 AC006557.5-201ENST00000603126 811 ntBASIC6.45□□□□□ -1.38
ALDH1A1P00352 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ALDH1A1P00352 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
ALDH1A1P00352 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ALDH1A1P00352 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ALDH1A1P00352 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ALDH1A1P00352 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ALDH1A1P00352 AP004607.3-201ENST00000530354 3915 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 DNM1P47-203ENST00000571780 12667 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 MIR133B-201ENST00000362210 119 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 Y_RNA.539-201ENST00000384635 107 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 RNU2-71P-201ENST00000411395 189 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 AC011933.1-201ENST00000413334 321 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 AL360081.1-201ENST00000428299 555 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 RN7SL481P-201ENST00000477764 299 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 RNU6-488P-201ENST00000515918 99 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 RNU5B-3P-201ENST00000516601 115 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 AC084783.1-201ENST00000565846 910 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 AC022884.3-201ENST00000579571 248 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 SNORD39.2-201ENST00000579995 76 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 MIR4311-201ENST00000580794 100 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 RN7SL52P-201ENST00000584271 284 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 RN7SL722P-201ENST00000617780 284 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 RN7SL565P-201ENST00000618246 284 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 AC091925.2-201ENST00000625059 256 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 CDRT1-208ENST00000630868 794 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 PABPC1P8-201ENST00000452851 2086 ntBASIC6.44□□□□□ -1.38
ALDH1A1P00352 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.44□□□□□ -1.38
ALDH1A1P00352 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ALDH1A1P00352 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms