Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SMG1P6-201ENST00000532337 2930 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.78□□□□□ -1.48
GRIN3BO60391 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIN3BO60391 LSM6P2-201ENST00000552208 177 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.78□□□□□ -1.48
GRIN3BO60391 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AC068790.5-201ENST00000602741 355 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 AL162413.1-201ENST00000603198 110 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 AC108467.2-201ENST00000617640 1597 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 AL022401.1-201ENST00000619498 108 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.78□□□□□ -1.48
GRIN3BO60391 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
GRIN3BO60391 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
GRIN3BO60391 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC093775.1-201ENST00000624154 1868 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 MIR383-201ENST00000362257 73 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 Y_RNA.111-201ENST00000363248 100 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AL031679.1-201ENST00000400616 525 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIN3BO60391 TMSB10P2-201ENST00000416049 131 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 PRPF38AP1-201ENST00000451976 933 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIN3BO60391 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC114786.4-201ENST00000508771 728 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIN3BO60391 LRRC34P2-201ENST00000514850 553 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 RNU6-445P-201ENST00000516949 107 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AP003181.2-201ENST00000528941 181 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 BBIP1P1-201ENST00000602999 279 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AL161734.1-201ENST00000609720 557 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC068722.2-201ENST00000618734 544 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 FER-210ENST00000628534 558 ntTSL 5 BASIC5.77□□□□□ -1.49
GRIN3BO60391 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC009313.2-201ENST00000417893 1941 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIN3BO60391 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIN3BO60391 AP001029.2-203ENST00000589795 4910 ntBASIC5.77□□□□□ -1.49
GRIN3BO60391 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 ZFRP1-201ENST00000457579 2970 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 AL049780.3-201ENST00000624612 1583 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 TLK1P1-201ENST00000456760 2440 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIN3BO60391 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIN3BO60391 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
GRIN3BO60391 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
GRIN3BO60391 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIN3BO60391 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
GRIN3BO60391 RNU6-1322P-201ENST00000364309 107 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 RNU6-730P-201ENST00000383954 104 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 RNU6-116P-201ENST00000384042 109 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 RNU1-82P-201ENST00000390851 165 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 RPL23AP32-201ENST00000395315 459 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.76□□□□□ -1.49
GRIN3BO60391 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIN3BO60391 JKAMPP1-201ENST00000413804 919 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 AC096632.1-201ENST00000427395 310 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 NPM1P24-201ENST00000428039 894 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC018644.1-201ENST00000429934 551 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms