Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
SMAD6O43541 Y_RNA.303-201ENST00000364998 94 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 Y_RNA.390-201ENST00000383932 102 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 RNU6-1042P-201ENST00000384204 107 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 SNORA37-201ENST00000384504 129 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 MIR93-201ENST00000385024 80 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.14□□□□□ -1.75
SMAD6O43541 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 MTCO3P31-201ENST00000405526 789 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 RNU4-6P-201ENST00000410804 122 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.14□□□□□ -1.75
SMAD6O43541 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.14□□□□□ -1.75
SMAD6O43541 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.14□□□□□ -1.75
SMAD6O43541 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.14□□□□□ -1.75
SMAD6O43541 RPS25P9-201ENST00000435591 252 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 UBE2V1P8-201ENST00000437166 265 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 LARP1BP3-201ENST00000437229 869 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 RPL21P89-201ENST00000444021 467 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.14□□□□□ -1.75
SMAD6O43541 COX6CP12-201ENST00000446748 202 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.14□□□□□ -1.75
SMAD6O43541 VN1R34P-201ENST00000447387 883 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AL592447.1-201ENST00000447592 540 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 EPS15P1-201ENST00000448836 336 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.14□□□□□ -1.75
SMAD6O43541 FGF7P6-202ENST00000451282 293 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 SSXP1-201ENST00000453640 473 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.14□□□□□ -1.75
SMAD6O43541 RNA5SP269-201ENST00000459032 137 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 RPL30P11-201ENST00000495304 339 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 DYNLL1P6-201ENST00000503440 264 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.14□□□□□ -1.75
SMAD6O43541 FTH1P21-201ENST00000512179 511 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.14□□□□□ -1.75
SMAD6O43541 RNA5SP154-201ENST00000516193 111 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 RNU6-1004P-201ENST00000516584 111 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 RNA5SP309-201ENST00000516670 106 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 RNU7-143P-201ENST00000516781 65 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.14□□□□□ -1.75
SMAD6O43541 OR4R3P-201ENST00000525084 838 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 OR7K1P-201ENST00000546439 926 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.14□□□□□ -1.75
SMAD6O43541 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.14□□□□□ -1.75
SMAD6O43541 TPRKBP2-201ENST00000565969 475 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.14□□□□□ -1.75
SMAD6O43541 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AC012417.1-201ENST00000582307 1039 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.14□□□□□ -1.75
SMAD6O43541 AC112220.3-201ENST00000605502 502 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AP003117.2-201ENST00000606010 545 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 MIR6868-201ENST00000611215 58 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 AL357080.1-201ENST00000617394 239 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
SMAD6O43541 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SMAD6O43541 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.14□□□□□ -1.75
SMAD6O43541 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 MTCO1P6-201ENST00000481192 1384 ntBASIC4.14□□□□□ -1.75
SMAD6O43541 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMAD6O43541 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.13□□□□□ -1.75
SMAD6O43541 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMAD6O43541 FAM91A3P-201ENST00000456826 2544 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.13□□□□□ -1.75
SMAD6O43541 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 RN7SKP280-201ENST00000364196 304 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 RNA5SP513-201ENST00000364648 118 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 RNU4-91P-201ENST00000364778 135 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMAD6O43541 RNU6-317P-201ENST00000384031 107 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 BTF3P7-201ENST00000407097 488 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 RNU6-628P-201ENST00000410675 107 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 AC092745.2-202ENST00000411880 369 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 RPS7P13-201ENST00000413955 498 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.13□□□□□ -1.75
SMAD6O43541 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.13□□□□□ -1.75
SMAD6O43541 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.13□□□□□ -1.75
SMAD6O43541 SEPT7P5-201ENST00000434048 306 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.13□□□□□ -1.75
SMAD6O43541 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.13□□□□□ -1.75
SMAD6O43541 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.13□□□□□ -1.75
SMAD6O43541 RAD23BP3-201ENST00000454157 1152 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 RPL36AP13-201ENST00000457490 317 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 AC073522.1-201ENST00000483312 377 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 ACTG1P13-201ENST00000486987 1043 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 FTH1P24-201ENST00000503502 462 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.13□□□□□ -1.75
SMAD6O43541 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms