Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PTP4A1P6-201ENST00000531034 478 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.7□□□□□ -1.98
UBFD1O14562 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.7□□□□□ -1.98
UBFD1O14562 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.7□□□□□ -1.98
UBFD1O14562 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.7□□□□□ -1.98
UBFD1O14562 EIF1AXP2-201ENST00000555940 413 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 H3F3AP1-201ENST00000559984 334 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.7□□□□□ -1.98
UBFD1O14562 AC010653.1-201ENST00000571108 881 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 ZNF92P3-201ENST00000596594 954 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.7□□□□□ -1.98
UBFD1O14562 CR381653.2-201ENST00000624041 768 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UBFD1O14562 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.7□□□□□ -1.98
UBFD1O14562 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UBFD1O14562 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
UBFD1O14562 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
UBFD1O14562 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
UBFD1O14562 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.69□□□□□ -1.98
UBFD1O14562 RNU6-452P-201ENST00000384406 107 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
UBFD1O14562 SNORA26.7-201ENST00000391288 122 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AC105402.1-201ENST00000413336 545 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.69□□□□□ -1.98
UBFD1O14562 AL031736.2-201ENST00000426573 787 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 RPS24P8-201ENST00000431490 402 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AL606490.7-201ENST00000433136 191 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 RPL21P2-201ENST00000440049 481 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.69□□□□□ -1.98
UBFD1O14562 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.69□□□□□ -1.98
UBFD1O14562 AC093392.2-201ENST00000450682 337 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AP002345.1-201ENST00000456493 928 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.69□□□□□ -1.98
UBFD1O14562 RPS27AP1-201ENST00000475545 471 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
UBFD1O14562 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.69□□□□□ -1.98
UBFD1O14562 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.69□□□□□ -1.98
UBFD1O14562 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.69□□□□□ -1.98
UBFD1O14562 AC110792.2-201ENST00000510278 224 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.69□□□□□ -1.98
UBFD1O14562 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.69□□□□□ -1.98
UBFD1O14562 BNIP3P7-201ENST00000605641 516 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AC018754.1-201ENST00000607486 925 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AC105429.2-201ENST00000610567 517 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 CYCSP41-201ENST00000616920 296 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AC006111.3-201ENST00000622137 383 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
UBFD1O14562 LRRC77P-213ENST00000637727 880 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.69□□□□□ -1.98
UBFD1O14562 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.69□□□□□ -1.98
UBFD1O14562 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UBFD1O14562 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.69□□□□□ -1.98
UBFD1O14562 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UBFD1O14562 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UBFD1O14562 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
UBFD1O14562 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
UBFD1O14562 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
UBFD1O14562 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.68□□□□□ -1.98
UBFD1O14562 OR5H2-201ENST00000355273 945 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.68□□□□□ -1.98
UBFD1O14562 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 AL160175.1-201ENST00000428124 247 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 HIGD1AP11-201ENST00000438361 280 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.68□□□□□ -1.98
UBFD1O14562 RAD1P2-201ENST00000446414 663 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 RPL36AP33-201ENST00000450395 310 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 RPS15AP1-201ENST00000457423 391 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.68□□□□□ -1.98
UBFD1O14562 AC083906.5-201ENST00000503722 328 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.68□□□□□ -1.98
UBFD1O14562 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.68□□□□□ -1.98
UBFD1O14562 RN7SKP82-201ENST00000516786 223 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 TRAV11-201ENST00000539512 339 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 MIR3124-201ENST00000582636 67 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.68□□□□□ -1.98
UBFD1O14562 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.68□□□□□ -1.98
UBFD1O14562 PCNAP1-202ENST00000595299 752 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 AC002076.2-201ENST00000617362 122 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UBFD1O14562 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.68□□□□□ -1.98
UBFD1O14562 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
UBFD1O14562 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UBFD1O14562 AC109315.1-201ENST00000584143 1347 ntBASIC2.68□□□□□ -1.98
UBFD1O14562 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBFD1O14562 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBFD1O14562 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
UBFD1O14562 SNORA44-201ENST00000384584 132 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AL512633.1-201ENST00000399931 655 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AL139281.1-201ENST00000422120 335 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.67□□□□□ -1.98
UBFD1O14562 AL139132.1-201ENST00000431587 344 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.67□□□□□ -1.98
UBFD1O14562 AC112220.1-201ENST00000434628 355 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms