Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TCRBV4S1A1TA0A5B7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TCRBV4S1A1TA0A5B7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC096644.4-201ENST00000563417 2912 ntBASIC2.26□□□□□ -2.05
TCRBV4S1A1TA0A5B7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ASNSP3-201ENST00000451989 1306 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 FAM35BP-202ENST00000497389 3337 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RPL26P37-201ENST00000411983 438 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 BTF3P9-201ENST00000418784 283 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 HMGB1P45-201ENST00000435986 653 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 HMGN2P20-201ENST00000437531 273 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC105272.1-201ENST00000438604 198 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 MED6P1-201ENST00000439659 713 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RSL24D1P2-201ENST00000445584 366 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 NIPA2P5-201ENST00000452282 464 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 HMGB1P26-201ENST00000452520 628 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 C1DP3-201ENST00000455013 423 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC146507.1-201ENST00000468335 354 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RNA5SP356-201ENST00000515972 94 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RN7SKP244-201ENST00000516513 307 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 SYF2P1-201ENST00000550658 413 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 MIR548Y-201ENST00000582739 110 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC245128.3-201ENST00000594721 748 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL035413.2-201ENST00000604801 525 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL590410.1-201ENST00000617925 333 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AP003485.2-201ENST00000623636 610 ntBASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL161431.1-201ENST00000618966 4205 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 MTCO1P8-201ENST00000416914 1523 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RNU6-185P-201ENST00000384421 107 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 MIR1289-1-201ENST00000408836 144 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RPL29P29-201ENST00000448725 423 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RPL31P13-201ENST00000484151 370 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 HIGD1AP13-201ENST00000509878 289 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC103783.1-201ENST00000520506 373 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 HPRT1P3-201ENST00000539521 576 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 MIR4474-201ENST00000579189 78 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 MIR3605-201ENST00000583214 100 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC024153.1-201ENST00000603103 365 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC007566.2-201ENST00000603642 413 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL359535.1-201ENST00000612100 1087 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL355493.4-201ENST00000618530 292 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC022079.2-201ENST00000619739 566 ntBASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TCRBV4S1A1TA0A5B7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL645568.2-201ENST00000432815 1337 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 SNORA18.3-201ENST00000384122 132 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RNU6-31P-201ENST00000384388 108 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 MIR607-201ENST00000385241 96 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL512633.1-201ENST00000399931 655 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 MTND4P13-201ENST00000402078 1023 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL354719.1-201ENST00000406535 843 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 USP9YP36-201ENST00000424581 829 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 AC104332.2-201ENST00000429959 156 ntBASIC2.23□□□□□ -2.05
TCRBV4S1A1TA0A5B7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms