Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RPL21P7-201ENST00000557463 483 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 MIR4277-201ENST00000578298 84 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC060771.1-201ENST00000582031 164 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 MIR548AB-201ENST00000584917 84 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AL356218.2-201ENST00000605264 187 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC087752.4-201ENST00000605911 462 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC090948.1-201ENST00000607464 549 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 OR10AB1P-201ENST00000609613 938 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC009268.2-201ENST00000621925 457 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC090582.1-201ENST00000636321 199 ntBASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A3BPQ9Y5P4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RNU6-629P-201ENST00000384061 103 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RNU6-114P-201ENST00000384704 105 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL7AP25-201ENST00000423357 805 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL23AP93-201ENST00000440847 484 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 MTCO2P7-201ENST00000446518 666 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RPS17P13-201ENST00000448974 407 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 SSXP1-201ENST00000453640 473 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC010285.1-201ENST00000470580 392 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 DEFB109F-201ENST00000491870 277 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL7P23-201ENST00000493874 747 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL12P22-201ENST00000519073 490 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC109635.4-202ENST00000531666 412 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC009101.1-201ENST00000568135 242 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL7P50-201ENST00000600588 727 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC112191.3-201ENST00000604371 277 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AL121873.1-201ENST00000616013 524 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC112200.1-201ENST00000625015 234 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AC006971.1-201ENST00000407916 4486 ntBASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A3BPQ9Y5P4 AP001350.1-201ENST00000601906 1524 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AL645937.1-201ENST00000641739 1652 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 MTND5P33-201ENST00000571250 1450 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 RNU6-1074P-201ENST00000383995 104 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 SNORD115.1-201ENST00000391109 76 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 MTND1P21-201ENST00000412991 285 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AL356583.2-201ENST00000426536 280 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 C4BPAP2-201ENST00000428434 478 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 FTH1P6-201ENST00000430768 320 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AL592447.1-201ENST00000447592 540 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 RPS24P6-201ENST00000452670 400 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL23AP65-201ENST00000475608 468 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC108022.1-201ENST00000493466 478 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC004069.2-201ENST00000505438 1114 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 PAICSP4-201ENST00000517543 1253 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 HMGN1P28-201ENST00000521340 364 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC022878.1-201ENST00000530684 149 ntBASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.03□□□□□ -1.6
COL4A3BPQ9Y5P4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms