Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 RPL21P3-201ENST00000395517 478 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 RNA5SP274-201ENST00000410484 108 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 MTCO1P52-201ENST00000433928 531 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 IFNA11P-201ENST00000446352 526 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 AC146507.2-201ENST00000460608 476 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 AL049870.4-201ENST00000555741 486 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 OR4H12P-201ENST00000556269 907 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 DEFB122-202ENST00000569013 197 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 MIR548Y-201ENST00000582739 110 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 XIST_intron.1-201ENST00000619444 68 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 AC103798.2-201ENST00000624292 632 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 SNORA50A-202ENST00000629536 136 ntBASIC4.05□□□□□ -1.76
NINLQ9Y2I6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NINLQ9Y2I6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NINLQ9Y2I6 U3.12-201ENST00000364498 214 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 RNU6-317P-201ENST00000384031 107 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 DHFRP5-201ENST00000406944 564 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 AC105402.1-201ENST00000413336 545 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 AC245054.2-201ENST00000415639 319 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 AC112653.1-201ENST00000443851 386 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.04□□□□□ -1.76
NINLQ9Y2I6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
NINLQ9Y2I6 RNA5SP24-201ENST00000516478 95 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NINLQ9Y2I6 AP002770.2-201ENST00000543613 532 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NINLQ9Y2I6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.04□□□□□ -1.76
NINLQ9Y2I6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NINLQ9Y2I6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NINLQ9Y2I6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NINLQ9Y2I6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.03□□□□□ -1.76
NINLQ9Y2I6 AC005189.1-201ENST00000431286 310 ntBASIC4.03□□□□□ -1.76
NINLQ9Y2I6 AP002345.1-201ENST00000456493 928 ntBASIC4.03□□□□□ -1.76
NINLQ9Y2I6 RN7SL75P-201ENST00000461926 281 ntBASIC4.03□□□□□ -1.76
NINLQ9Y2I6 HMGB1P47-201ENST00000511281 589 ntBASIC4.03□□□□□ -1.76
NINLQ9Y2I6 OR5D17P-201ENST00000531492 978 ntBASIC4.03□□□□□ -1.76
NINLQ9Y2I6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 AC015871.2-201ENST00000603605 948 ntBASIC4.03□□□□□ -1.76
NINLQ9Y2I6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 AL353743.4-201ENST00000422653 1547 ntBASIC4.03□□□□□ -1.76
NINLQ9Y2I6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NINLQ9Y2I6 RNU4-31P-201ENST00000384211 141 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 RN7SKP58-201ENST00000411010 305 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 RPL37P4-201ENST00000448908 268 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 MTND2P8-201ENST00000450555 1025 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 MTND3P6-201ENST00000485242 339 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 OR4U1P-201ENST00000554958 912 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 HSPA8P4-201ENST00000511877 1920 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC138915.3-201ENST00000562908 1389 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 SEPT7P7-201ENST00000420492 1301 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AL512504.1-201ENST00000415494 778 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 MED6P1-201ENST00000439659 713 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC007566.2-201ENST00000603642 413 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 AC064859.1-201ENST00000624741 174 ntBASIC4.02□□□□□ -1.77
NINLQ9Y2I6 GABRG2-229ENST00000641017 3628 ntBASIC4.01□□□□□ -1.77
NINLQ9Y2I6 AC093831.2-201ENST00000624393 3427 ntBASIC4.01□□□□□ -1.77
NINLQ9Y2I6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NINLQ9Y2I6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NINLQ9Y2I6 AC000367.1-201ENST00000452711 1766 ntBASIC4.01□□□□□ -1.77
NINLQ9Y2I6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms